| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0779 |
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| Symbol | |
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| ID | 6962135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 856075 |
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| End bp | 856761 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643382048 |
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| Product | nucleotidase |
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| Protein accession | YP_002265087 |
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| Protein GI | 209809548 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR02254] HAD superfamily (subfamily IA) hydrolase, TIGR02254 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.655006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATGA AATACCAATG GATATTATTT GATGCCGATG AAACCTTGTT TTATTTTGAT
GCCTTTGCAG GTTTACAACG CATGTTTTCA GGTTATGGCG TTGAGTTTGG GAAAGAACAA
TTTATTGAAT ATCAATTGGT AAATAAACCG CTGTGGGTAC AATATCAAGA CAATGAAATT
ACGGCTTTGC AACTTCAAGA AACACGATTT GAAGAGTGGG CTAAAAAAGT AGGTGTTACG
CCAAAAGCAA TGAATAGCGC GTTTATGATG GCAATGGCCG AGATCTGTAC GCCATTAGAT
GGTGCTAGAG AGTTGCTTGA TTCATTGTTA GCGAGCAATG TGAAAATGGG TATTATTACG
AATGGATTTA CGGAATTACA GAAGATCCGC TTAGAGAAAA CGGAATTTAG CCATTATTTT
GAGTTGATCA TTATTTCAGA GCAAGTCGGA ATCGCAAAAC CAGATAAACG CATTTTTGAA
CATACTTTTT CGATGATGGG GGAGGTGGAT TTATCCGCGA TACTTATGGT TGGAGATAAC
CCTGATTCAG ACGTGCTTGG TGGCATGAAT GCAGGTATTG ACACATGTTG GTTAAATGAA
GCCGGTAAAA CGTGTCCTGA AGGCGTAGAG CCAACCTATA CTGTGGGTTC ACTGGTAGCA
TTACAAACTA TTTTAGAAAG CGCTTAA
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| Protein sequence | MNMKYQWILF DADETLFYFD AFAGLQRMFS GYGVEFGKEQ FIEYQLVNKP LWVQYQDNEI
TALQLQETRF EEWAKKVGVT PKAMNSAFMM AMAEICTPLD GARELLDSLL ASNVKMGIIT
NGFTELQKIR LEKTEFSHYF ELIIISEQVG IAKPDKRIFE HTFSMMGEVD LSAILMVGDN
PDSDVLGGMN AGIDTCWLNE AGKTCPEGVE PTYTVGSLVA LQTILESA
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