| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0721 |
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| Symbol | nagE |
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| ID | 6962088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 793484 |
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| End bp | 794944 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643381996 |
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| Product | PTS system permease for N-acetylglucosamine and glucose |
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| Protein accession | YP_002265034 |
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| Protein GI | 209809496 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG1264] Phosphotransferase system IIB components |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR01998] PTS system, N-acetylglucosamine-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.729002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGTAC TTGGTTATAT GCAGAAAGTA GGTAAGGCGC TGATGGTTCC CGTCGCTACG
CTACCTGCTG CTGCAATCTT AATGGGTGTT GGTTACTGGA TGGATCCAAC AGGCTGGGGC
GCAAATAGCG TACTTGCTGC ATTTCTAATT AAATCAGGTG GCGCTATTAT CGATGTAATG
CCAATGCTAT TTGCGATTGG TGTTGCGTTT GGTTTAAGTA AAGACAAAAA TGGTTCAGCG
GCACTTGCCG GTTTTATTTG CTTTACTGTT GTTACTACCC TTTTATCTCC AGCGGTTGTT
GCTCAACTTG AAAGCATTCC ATTGGATCAA GTTCCTTCTG CATTCGCAAA AATCAACAAC
CAATTTGTTG GTATTATTGT CGGTATTATT TCTGCTGAAA TTTACAACAA ATACTCAACG
GTTGAACTAC CAAAAGCATT AGCTTTCTTT AGTGGTAAAC GTCTTGTTCC TATCCTGACA
TCAATTGCGG GTATGGCATT ATCATTCGTT CTTTTATACG TATGGCCTGC CATTTTTGAC
GCCCTAATCT CTTTCGGTAC TCAACTTCAA TCAATGGGTG CGGTTGGTGC TGGTCTGTTC
GGTTTCTTTA ACCGTTTAAT GCTTACAGTT GGTATGCACC ATGCCCTTTA CCCTGTATTT
TGGTTTGATG TTGTTGGTAT TAACGACATT CCAAATTTCT TAGGTGGTGC ACAATCTATT
GCTGATGGCA CTGCGGTTAT CGGTCAAACG GGTATGTACC AAGCGGGTTT CTTCCCTATC
ATGATGTTTG GTCTGCCAGG CGCAGCTCTG GCTATTTACC ATTGTGCAGA AGAACGCAAT
AAAGCCGCTG TTTTCTCTAT CATGCTTGCA GCAGCAATGG CGTCATTCTT TACTGGTATT
ACAGAACCTC TAGAATTCAG CTTTATGTTC CTTGCTCCAT GGTTGTATTT AATTCATGCA
ATCTTAACGG GTATTTCTTT ATACATCGCT GCAAGTATGC ATTGGATGGC AGGTTTTGGT
TTTTCAGCAG GTCTTGTTGA TTTCGCTTTA TCAACCCAGA ATCCATTGGC GGTTAAGTGG
TACATGCTTA TTCCACAAGG TCTTGTATTC TTTGTTCTTT ACTACACTAT ATTTAGATTT
GCGATTAAGA AGTTCAACTT CCTAACTCCG GGTCGTGGTG AAGACATGAA TAAAGATGAT
TCTGTAGAAG AAAACATTAC TGATGTTGCC ACTGCGTATA TCGAAGCAAT TGGTGGTTCA
GAAAATATCC TAGAAGTAGA TAACTGTATT ACACGTCTAC GTTTAACCGT GAAAGATTCA
AGCCTTGCTG ATAGCGACAA ACTTAAATCT CTTGGTGCCA TTGCAGTGGT TCCAATGGGT
AAAGGTGGTC TGCAAGTTAT TATAGGCTTA GGAAAAGTGG ATAGAGTCGC TGCAGAAATG
AAAGTGATTT TAAAAGCCTA A
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| Protein sequence | MNVLGYMQKV GKALMVPVAT LPAAAILMGV GYWMDPTGWG ANSVLAAFLI KSGGAIIDVM
PMLFAIGVAF GLSKDKNGSA ALAGFICFTV VTTLLSPAVV AQLESIPLDQ VPSAFAKINN
QFVGIIVGII SAEIYNKYST VELPKALAFF SGKRLVPILT SIAGMALSFV LLYVWPAIFD
ALISFGTQLQ SMGAVGAGLF GFFNRLMLTV GMHHALYPVF WFDVVGINDI PNFLGGAQSI
ADGTAVIGQT GMYQAGFFPI MMFGLPGAAL AIYHCAEERN KAAVFSIMLA AAMASFFTGI
TEPLEFSFMF LAPWLYLIHA ILTGISLYIA ASMHWMAGFG FSAGLVDFAL STQNPLAVKW
YMLIPQGLVF FVLYYTIFRF AIKKFNFLTP GRGEDMNKDD SVEENITDVA TAYIEAIGGS
ENILEVDNCI TRLRLTVKDS SLADSDKLKS LGAIAVVPMG KGGLQVIIGL GKVDRVAAEM
KVILKA
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