| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0714 |
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| Symbol | cusA |
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| ID | 6962082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 783284 |
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| End bp | 786409 |
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| Gene Length | 3126 bp |
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| Protein Length | 1041 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643381989 |
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| Product | cation efflux system protein |
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| Protein accession | YP_002265027 |
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| Protein GI | 209809489 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCCG CCATTATTCG TTGGTCGATT AAAAATCGAT TTTTAGTTCT GGTTGCGACT
TTTGCTTTAG TTGTTGCAGG AATTTACAGT GTAAAGAATA CACCAGTCGA TGCTTTGCCG
GATCTTTCAG ATGTTCAAGT GATCATTAAA ACCAGCTACC CAGGTCAAGC CCCTCAAGTG
GTGGAAGATC AGGTGACTTA CCCGTTAACT ACCGCCATGC TTGCGGTTCC GGGAGCGGAA
ACGGTTCGTG GTTTTTCATT CTTTGGTGAT TCCTATGTTT ATATCATTTT TAATGATGAT
ACTGACATGT ACTGGGCGCG TTCGAGGGTG TTAGAGTATT TAAGCCAAGT TGCGCCTAGA
TTACCCGCAG AGGCAAAGCC CACATTAGGG CCCGATGCGA CAGGGGTGGG CTGGGTATAC
AGTTATGTAT TACAAGATAA AACCGGTAAA CACGATTTAG CCGAATTACG CAGCTTGCAA
GATTGGTTCT TAAAATACGA ACTGCAAACG GTCGATGGCG TATCAGAAGT TGCGACCGTC
GGCGGGATGG TGAAGCAATA TCAGGTGGAA ATTGATCCTG ATAAACTACG AGCTTATAAC
CTAACGCTAC AACAAATTAA TAAAGCCATT AAAGAGGGGA ATCAAGAGGC GGGCGCTTCG
GTTATCGAAG TCGCGGAAGC TGAACACATG GTTCGTACAT CGGGTTACTT AAGCAGTATT
GAAGACATAA AATCATTGCC GCTAAAAGTA ACCGATAAGG GAACGCCTTT ATTGCTTGGT
GATATCGCTG ATATTAATCT TGGACCACAA ATGCGCCGTG GTATCTCTGA ATTTAATGGA
GAAGGCGAAG CCGTTGGTGG TGTGATTGTC ATGCGCTTTG GTGAAAATGC CAGTAACGTC
ATTTCAAATG TAAAAGAGAA ATTGGCTCAA TTACAAAAAG GCTTACCGGA AGGGGTAGAA
ATTAAAGCGA CTTATGATCG CTCTAAACTT ATTGACCATG CAGTAACAAA TTTATGGGAG
AAATTGGCTG AAGAGTTTAT CGTTGTTGCC ATTGTTTGTG CTTTATTCTT ATTTCACATT
CGTTCTTCGT TGGTTATCGC ATTAAGTCTG CCTGTTGGGA TCCTTTGTGC GTTCATTGTT
ATGCATTGGC AAGGTATTAA TGCCAACATC ATGTCATTAG GCGGTATCGC AATTGCCATT
GGTGCAATGG TTGATGGTGC TATCGTAATG ATAGAAAACG TCCATAAACA CATAGAAAAA
ACACCATTAA CGGACGAAAA TCGTTGGCAG GTAATAGGGA AAGCGGCAGA AGAAGTTGGA
CCTCCACTCT TTTTCTCATT GCTTATCATT ACCTTAAGCT TTGTTCCTGT ATTTGCATTA
GAAGGCCAAG AAGGGAAGAT GTTCTCTCCA TTAGCCTTCA CTAAAACCTT TGCAATGGCG
GCTTCTGCTG GCCTAGCAAT TACCTTAGTA CCTGTATTAA TGGGCTATTT CGTTCGAGGT
AAAATATTGC CTGAGAACAA AAACCCAATA AACAAAACGC TAGTGGCACT TTACAGACCA
TTACTGAATT TGAGTTTACG CTTTCCAAAA ACGATACTTT TGGTTGCCGT TATCTTAATG
GGATCGTCAT ATTATCCAAT CTCTAAAATG GGCAGTGAGT TTATCCCACC ATTGGATGAG
GGCGATTTAA TGTACATGCC AACGACATAT CCAGGGATCT CTATTGGTAA AGCGCGTGAA
CTATTACAGC AAACCAATAA ATTAATTAAA ACCGTTCCAG AAGTCGATAC CGTGTGGGGA
AAAGTGGGGC GAGCAGAAAC AGCAACCGAT CCGGCACCAT TAACCATGAT AGAGACGGTT
ATTCAGTTCA AGCCTAAAAA TGAATGGCGT GACGGTGTAA CTACTGAGTC AATTAAAAAA
GAGCTAGACC AATTGATTCA ATTTCCTGGA ATAACAAATG CGTGGGTGAT GCCAATCAAA
ACGCGCATCG ATATGCTAGC AACAGGAATT AAAACCCCAA TAGGGATAAA GATAGCGGGA
CCCGATCTTA ACGTAATAGA AAAGATCGGC GCAGAGTTAG AACCTATTTT AAATAACGTT
AAAGGAACCA CCTCGGTTTA TGCAGAGCGA GTCGCTGGTG GGCGTTATAT AAATATCGAT
ATAAAACGTC GTCAAGCCGC TCGATATGGT TTGAATATTA AAGACATTCA ACAAGTGATA
TCAACCGCAG TGGGTGGTAT GAATGTAGGT GAAACCATTG AAGGATTAGA GCGTTACCCA
ATTAATGTTC GTTATCCACA ATCGTATCGT GATTCTGTTG TTAAGTTGCA GAACTTGCCA
TTGATAACGG CGAACGGTGC TCGAATTGCC TTAGCTGATG TCGCGGATAT TCGTTATGAA
GATGGTCCTC CGATGATAAA AACAGAAAAC GCACGACCTA ATGGTTGGGT GTTTGTCGAT
ATTGACGGTC GAGATCTAGG TTCTTATGTG CATGAGGCTC AACAAGCAGT GCATGATCAA
TTGGATTTAC CCGCGGGCTA TTCCCTTGGT TGGTCTGGCC AATACGAATA CATGGAACGA
GCAAAAGAGA AATTAACGAC GGTTATTCCT GTAACCATCG CGATTATTAT GCTGCTTTTG
TATTTAAGTT TTAAACGAGT TGGTGAAGTG TTAATTATCA TGGGGACATT GCCGTTAGCT
ATGGTTGGCG GTCTGTGGCT AATGCACATC TTAAACTTTA ATTTTTCGAT TGCCGTTGGT
GTAGGGTTTA TTGCTTTATC CGGTGTTGCG GTTGAGATTG GTGTGATCAT GTTGGTGTAT
TTGAACCAAG CATGGGATGA AAAACAAGCG ACAGCAAAAG AAAACAGTAA CTCGGTAACA
CAACAAGATT TAACGTTAGC CATTGGTGAG GGCGCAGGAT TACGTGTTCG TCCTGTCATG
ATGACGGTAC TGACAGTGAT CATCGGTTTA ATTCCAATTA TGTATGGCTC CGGTACCGGA
TCAGAAGTAA TGCAGCGTAT TGCAGCCCCA ATGATAGGCG GGATGGCGTC GGCATTATTA
TTGACCTTAG TCGTTATCCC TGCGGTATTC AAATTATGGA AACAGCGTTT GTGTAAAGAT
TTTTAA
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| Protein sequence | MIPAIIRWSI KNRFLVLVAT FALVVAGIYS VKNTPVDALP DLSDVQVIIK TSYPGQAPQV
VEDQVTYPLT TAMLAVPGAE TVRGFSFFGD SYVYIIFNDD TDMYWARSRV LEYLSQVAPR
LPAEAKPTLG PDATGVGWVY SYVLQDKTGK HDLAELRSLQ DWFLKYELQT VDGVSEVATV
GGMVKQYQVE IDPDKLRAYN LTLQQINKAI KEGNQEAGAS VIEVAEAEHM VRTSGYLSSI
EDIKSLPLKV TDKGTPLLLG DIADINLGPQ MRRGISEFNG EGEAVGGVIV MRFGENASNV
ISNVKEKLAQ LQKGLPEGVE IKATYDRSKL IDHAVTNLWE KLAEEFIVVA IVCALFLFHI
RSSLVIALSL PVGILCAFIV MHWQGINANI MSLGGIAIAI GAMVDGAIVM IENVHKHIEK
TPLTDENRWQ VIGKAAEEVG PPLFFSLLII TLSFVPVFAL EGQEGKMFSP LAFTKTFAMA
ASAGLAITLV PVLMGYFVRG KILPENKNPI NKTLVALYRP LLNLSLRFPK TILLVAVILM
GSSYYPISKM GSEFIPPLDE GDLMYMPTTY PGISIGKARE LLQQTNKLIK TVPEVDTVWG
KVGRAETATD PAPLTMIETV IQFKPKNEWR DGVTTESIKK ELDQLIQFPG ITNAWVMPIK
TRIDMLATGI KTPIGIKIAG PDLNVIEKIG AELEPILNNV KGTTSVYAER VAGGRYINID
IKRRQAARYG LNIKDIQQVI STAVGGMNVG ETIEGLERYP INVRYPQSYR DSVVKLQNLP
LITANGARIA LADVADIRYE DGPPMIKTEN ARPNGWVFVD IDGRDLGSYV HEAQQAVHDQ
LDLPAGYSLG WSGQYEYMER AKEKLTTVIP VTIAIIMLLL YLSFKRVGEV LIIMGTLPLA
MVGGLWLMHI LNFNFSIAVG VGFIALSGVA VEIGVIMLVY LNQAWDEKQA TAKENSNSVT
QQDLTLAIGE GAGLRVRPVM MTVLTVIIGL IPIMYGSGTG SEVMQRIAAP MIGGMASALL
LTLVVIPAVF KLWKQRLCKD F
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