| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0707 |
|---|
| Symbol | hutU |
|---|
| ID | 6962078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011313 |
|---|
| Strand | + |
|---|
| Start bp | 773953 |
|---|
| End bp | 775647 |
|---|
| Gene Length | 1695 bp |
|---|
| Protein Length | 564 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643381983 |
|---|
| Product | urocanate hydratase |
|---|
| Protein accession | YP_002265021 |
|---|
| Protein GI | 209809483 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2987] Urocanate hydratase |
|---|
| TIGRFAM ID | [TIGR01228] urocanate hydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.760092 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACACA CCTCATCGTC TAATCCTCGA CTAGATGAAT CTCGGACTAT TATCGCGCCA
ACAGGCACTG CATTAACGGC GAAATCTTGG TTAACCGAAG CCCCACTTCG TATGTTAATG
AATAACTTAC ATCCAGACGT CGCTGAACAC CCTCATGCGT TAGTGGTATA TGGTGGTATT
GGTCGTGCAG CACGAAATTG GCAATGTTAC GACAAGATTG TAGAAGTGCT AACCCGCCTT
GAAGACGATG AAACCTTGCT AGTGCAATCA GGAAAACCTG TCGGTGTATT TAAAACCCAC
ACCAATGCGC CGCGTGTCCT CATTGCAAAT TCAAATATTG TGCCTCACTG GGCAAATTGG
GAGCATTTTA ACGAGCTCGA TAAACAAGGC TTGATGATGT ATGGCCAAAT GACGGCTGGC
AGTTGGATCT ACATTGGATC TCAAGGCATT GTTCAAGGCA CTTACGAAAC GTTTGTTGCT
ATGGCTCGTC AGCACTTTGA TGGTAAAGCC GCAGGTCGAT GGGTATTAAC TGGCGGCCTT
GGTGGTATGG GTGGCGCGCA ACCTCTCGCA GCAACCATGG CTGGGTTTTC AATGCTTGCT
GTTGAGTGTG ATGAATCACG TATCGATTAT CGCTTACGCA CAGGTTATGT GGATCGCAAA
GCCACCACAT TAGACGAAGC ATTGGCAATA ATAGAAGAAT CAAAACAGTC TGGTACACCC
GTGTCTGTTG GCTTATTAGG TAATGCCGCC GATGTGTATG CCGATATCGT TCAACGCGGT
ATTGTGCCGG ATATTACCAC CGACCAAACG TCCGCTCATG ATCCCCTCAA TGGCTACTTA
CCGCAAGGTT GGTCAATGGA ACAGGCGGCA GAAATGCGCT TAAAAGACGA ACCTGCAGTC
GTTATCGCAG CTAAAAAGTC CATGGCGATT CAAGTCCAAG CTATGCTTGA TTTACAGAAA
TCAGGATCAG CAACGGTAGA TTATGGTAAC AACATTCGTC AAATGGCATT AGAAGAAGGC
GTGGCTAATG CGTTTGATTT CCCAGGATTT GTGCCTGCTT ATATTCGTCC GCTTTTTTGT
GAAGGCATCG GGCCTTTCCG TTGGGCGGCA CTTTCTGGCG ATCCAGAAGA CATCTACAAA
ACCGATCAAA AAGTAAAAGA ACTTATTCCT GACAATCCGC ATTTGCACAA TTGGCTTGAT
ATGGCGCGTG AACGTATCCA GTTCCAAGGA TTACCGGCTC GTATTTGTTG GGTTGGCTTA
AAAGATCGTG CTCGTCTCGG TAAAGCTTTC AACGAAATGG TAAAAAATGG AGAATTAAAA
GCACCGATTG TCATTGGTCG AGATCATCTT GACTCAGGTT CTGTTGCCAG TCCAAACCGT
GAAACAGAAG GTATGATGGA TGGCTCTGAT GCCGTATCCG ATTGGCCACT GCTAAACGCC
CTACTTAACA CCGCATCGGG TGCGACTTGG GTATCGCTTC ATCATGGTGG TGGCGTTGGC
ATGGGATTCT CTCAACATTC AGGCATGGTT ATTGTTTGTG ATGGTACCGA TGACGCAGCA
GAACGAGTTG GCCGAGTCCT ACATAATGAC CCAGCAACAG GGGTTATGCG CCATGCGGAT
GCGGGTTATG ACATCGCAAT CAATTGTGCT AAAGAACAAA ACTTAGATTT ACCAATGCTA
TCTGAACCAA AATAA
|
|---|
| Protein sequence | MTHTSSSNPR LDESRTIIAP TGTALTAKSW LTEAPLRMLM NNLHPDVAEH PHALVVYGGI
GRAARNWQCY DKIVEVLTRL EDDETLLVQS GKPVGVFKTH TNAPRVLIAN SNIVPHWANW
EHFNELDKQG LMMYGQMTAG SWIYIGSQGI VQGTYETFVA MARQHFDGKA AGRWVLTGGL
GGMGGAQPLA ATMAGFSMLA VECDESRIDY RLRTGYVDRK ATTLDEALAI IEESKQSGTP
VSVGLLGNAA DVYADIVQRG IVPDITTDQT SAHDPLNGYL PQGWSMEQAA EMRLKDEPAV
VIAAKKSMAI QVQAMLDLQK SGSATVDYGN NIRQMALEEG VANAFDFPGF VPAYIRPLFC
EGIGPFRWAA LSGDPEDIYK TDQKVKELIP DNPHLHNWLD MARERIQFQG LPARICWVGL
KDRARLGKAF NEMVKNGELK APIVIGRDHL DSGSVASPNR ETEGMMDGSD AVSDWPLLNA
LLNTASGATW VSLHHGGGVG MGFSQHSGMV IVCDGTDDAA ERVGRVLHND PATGVMRHAD
AGYDIAINCA KEQNLDLPML SEPK
|
|---|
| |