Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0676 |
Symbol | |
ID | 6962057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 742420 |
End bp | 743463 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 643381955 |
Product | hypothetical protein |
Protein accession | YP_002264993 |
Protein GI | 209809455 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00398993 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTTA AATTTCACTT AGAAAAAAAT AAACAGCCAA CGACCGATAA TGGAATGAAG GTATTGTATG GTAATGCAAA AAGAAGTGGT TACCGTATAC GTTGGTATGC CATTTTAGCA TTGGTATTAA GCCCAATATT TGCGATGTTA TATTACTTTT TTCAACAATA CGTATTAACG ATTGCACCCG GTATCATCAC GACAGAACCT GTGATATTAA CTGCATCTCA AGATGCAGTT GTTGAATCTA TTAATATAAA AGAAGGTGAC GAGGTTTCAA GTAATCAATT TTTAATGGAG CTAAAAGATT CTGCTTTAGA TAATGACATC ATTTTTTTAA GACATGAATT GAAAAAAATA AAGGTTAATA ACAAAATTAA AAAAGATAAC TTAACATATT ATACTCTAGC AATAGATAAT GCTAAGTCTA GTTTTATTAA TATAAATAGA ATAAAAATAA ATTATGATAA ATATATAAAA GAAGGAAAAG TATCTCAGGT TGATTACGCT GCTATTCTTG GGATGTATAG TAATGCTCAG AATTTAGTAA CAAATGCTAA TATAATGTAT TCGAAAGCTA AAATTGATGA TAATCAAAGG GATATTGCAG GTGCTATCGC TGGAGTGATT CGAAATTTAA ATAAAGAATT AGTGACTAAA TTAAGTCAAT ATGATTCTCT TTTTATACGT TCACCTTACA TTGGTAATAT TGTTGAAATT AATGCGGTCA TAGGGCAAAG AGTTAAAGAG GGGGATTATT TAGCAACAGT TTCATCAAAG TTACCCCCAT TTGTCATTGC GTATTTAAAC CCAAAATACA TCGATAAAGC GAAAGAGGGC TCATTAGTCA CCATTATTTT ACCAAGTGGA GTTCGCCTAA AAGGAGAAGT ATCTCTGGCG ATTAAAACGG CATCGAAATT ACCAACTCAG TTAGCCAAAC CTTTTGAGGG CACCAAGGCT CTACTTAAAG TAAAGGTTGA TATTATCAAT GAGTTGAATG GAGTTTCTTG GGTGGAGGGT ATGCCAGTTA ATGTCTCGTT TTAG
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Protein sequence | MKVKFHLEKN KQPTTDNGMK VLYGNAKRSG YRIRWYAILA LVLSPIFAML YYFFQQYVLT IAPGIITTEP VILTASQDAV VESINIKEGD EVSSNQFLME LKDSALDNDI IFLRHELKKI KVNNKIKKDN LTYYTLAIDN AKSSFININR IKINYDKYIK EGKVSQVDYA AILGMYSNAQ NLVTNANIMY SKAKIDDNQR DIAGAIAGVI RNLNKELVTK LSQYDSLFIR SPYIGNIVEI NAVIGQRVKE GDYLATVSSK LPPFVIAYLN PKYIDKAKEG SLVTIILPSG VRLKGEVSLA IKTASKLPTQ LAKPFEGTKA LLKVKVDIIN ELNGVSWVEG MPVNVSF
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