| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0673 |
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| Symbol | gltS |
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| ID | 6962056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 737377 |
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| End bp | 738600 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643381952 |
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| Product | sodium/glutamate symport carrier protein (glutamate permease) |
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| Protein accession | YP_002264990 |
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| Protein GI | 209809452 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0786] Na+/glutamate symporter |
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| TIGRFAM ID | [TIGR00210] sodium--glutamate symport carrier (gltS) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.141822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAAACA CTCTATCTAT CGGCGCACTA GAATCTTTTT TAATTGCCAT CGCCGTACTT
TTTCTAGGCC ACCTAATCAA CTCTAAAGTT GTGTTTTTTA AGAAATACAA TATTCCAGAA
CCCATTGTTG GCGGATTAAT CGTCGCTTTT GCTATTACCG CTTTGCATTT TCAAGGGATT
AATCTTGAGT TTTCATTGCC GCTACAAAGT ACATTCATGT TGATGTTCTT CAGTACTGTC
GGTTTAGCAG CGAACTATAC ACAACTGATA AAAGGCGGAA CAAAGGTATT CTTATTCCTT
GCTGTTGCCT CTTTCTATAT CATTATTCAA AATGCAGTTG GTGTTAGTTT AGCAAGTGCT
ATGGGCTTAA ATCCATTAAT GGGTCTTATT GCTGGTTCGA TCACTTTATC TGGTGGTCAT
GGTACGGGTG CTGCTTGGTC CCAAACGTTT GCTGAAACTT ATCATCTAAA CACGCTAGAG
CTAGCAATGG CATCTGCGAC CTTTGGTTTG GTTATGGGTG GCTTAATCGG TAGCCCGATT
GCACAAAAAT TGATTCATAA ACATAAATTA GAATCAGAAT ATGGCACCGG TGTGGATACC
CATACCCGCT TTCCTGAACT CGTCACTTAC AATGAACGAG AAGAAGAAAA AGTGACGGCA
AAAAAAGTGA CCGAAACCTT ATTCATTCTA CTCATTTGTG TTGTAGGCGC TGGCCATTTA
AGTGATTTTG TAGGCAGCTT TGATATTGCT TGGCTTAAAA TTCCTGATTT TGTTTACGCT
TTATTTATTG GTGTTTTCAT CACTAATATT ACTGAGGTAA CAAAAATCCA TAAGATTGAT
ACTGAAACTG TTGATATCTT AGGAACCGTT TCGTTGGCTC TGTTCTTAGC AATGGCATTA
ATGAGTTTAA AATTGTGGAA CATCTTTGAT CTTGCGATTC CACTTCTTAT TATTTTATCG
GTTCAAACCG TTGTTCTTGC TTTCTTCTCT TACTTTGTCA CTTTCAGAGT AATGGGGTCA
AACTATGACG CCGCTGTTAT GGCTGGTGGC CATTGTGGCT TTGGATTAGG AGCAACACCA
ACAGCAGTAA TGAATATGGG CTCTTTAGTG TCTCGCTTTG GTCCATCGCC ACAAGCCTTT
ATGGTAGTTC CAATTGTTGG TGCTTTCTTT ATTGATATAG TGAACTTAAT TATTCTACAA
ACTTACATTA GCTTTATTGG TTAA
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| Protein sequence | MTNTLSIGAL ESFLIAIAVL FLGHLINSKV VFFKKYNIPE PIVGGLIVAF AITALHFQGI
NLEFSLPLQS TFMLMFFSTV GLAANYTQLI KGGTKVFLFL AVASFYIIIQ NAVGVSLASA
MGLNPLMGLI AGSITLSGGH GTGAAWSQTF AETYHLNTLE LAMASATFGL VMGGLIGSPI
AQKLIHKHKL ESEYGTGVDT HTRFPELVTY NEREEEKVTA KKVTETLFIL LICVVGAGHL
SDFVGSFDIA WLKIPDFVYA LFIGVFITNI TEVTKIHKID TETVDILGTV SLALFLAMAL
MSLKLWNIFD LAIPLLIILS VQTVVLAFFS YFVTFRVMGS NYDAAVMAGG HCGFGLGATP
TAVMNMGSLV SRFGPSPQAF MVVPIVGAFF IDIVNLIILQ TYISFIG
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