| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0669 |
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| Symbol | rbgA |
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| ID | 6962482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 731955 |
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| End bp | 732890 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643381948 |
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| Product | ribosomal biogenesis GTPase |
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| Protein accession | YP_002264986 |
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| Protein GI | 209809448 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1161] Predicted GTPases |
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| TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.378944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCATTC AATGGTACCC GGGCCACATG CACAAAGCTC AAAAAGAGAT CGCAGAAGTG
ATCCCTAAAA TGGATGTGAT CATTGAAGTA CTTGATGCTC GTATCCCTTT CAGTAGTGAG
AATCCAATGA TCGCCTCTCT ACGTCAAGAT AAGCCTTGTA TTAAAGTATT GAACAAGCGT
GATTTAGCTG ATCCAGAAGT GACTCAACTT TGGATTGAGC ATCTTGAGAA AGAGCAAGGT
GTCACAGCAA TGGCAGTGAC AACTAACAAC CCAGATGAAA TCCATAAAAT TATGGAAAGA
TGCCGTAAAT TAGTTCCACA CCGTGAAGCG ATGGGTAAAA ATGTACGTAC TATGATCATG
GGTATCCCAA ACGTAGGGAA ATCAACCATC ATTAATACAC TTGCTGGCCG AATGATTGCA
ATCACGGGTA ACCAACCAGC AGTAACACGT CGCCAACAAC GAATTAATCT TCAAAATGGT
GTGGTTCTTT CTGATACCCC AGGGATTTTG TGGCCAAAAG TAGAGAACCC ACACAGTGGT
TTCCGTCTTG CTGCAACTGG TGCGGTAAAA GATACGGCAA TGGAATACGA TGAAGTTGCT
TTCTATACCG TTGAGTATCT AGCACAGCAA TATCCAGAAC GTTTAAAAGA GCGTTACAAT
TTAGAAGATT TGCCAGATAA CGATTTAGAA TTAATGGAAG CCATTGGTCG CAGTCGTGGT
TGTTTACAAT CTGGTGGACG AATCAATATC TACAAAGCGT CTGAAATTCT ACTTCATGAA
CTTCGCTCTG GTACATTAGG TCAATTGACT CTAGAACGAC CTGAAATGAT TTCAGCTGAA
TTAGAACAAG TTGAGCGTGA TGCTGCGTTA AAAATTGAAT TACAGATTAA GAAAAAAGAA
GAACGTCGTA AGCGTTACTT AAAAAATAAA CGTTAA
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| Protein sequence | MSIQWYPGHM HKAQKEIAEV IPKMDVIIEV LDARIPFSSE NPMIASLRQD KPCIKVLNKR
DLADPEVTQL WIEHLEKEQG VTAMAVTTNN PDEIHKIMER CRKLVPHREA MGKNVRTMIM
GIPNVGKSTI INTLAGRMIA ITGNQPAVTR RQQRINLQNG VVLSDTPGIL WPKVENPHSG
FRLAATGAVK DTAMEYDEVA FYTVEYLAQQ YPERLKERYN LEDLPDNDLE LMEAIGRSRG
CLQSGGRINI YKASEILLHE LRSGTLGQLT LERPEMISAE LEQVERDAAL KIELQIKKKE
ERRKRYLKNK R
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