| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0664 |
|---|
| Symbol | |
|---|
| ID | 6962051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011313 |
|---|
| Strand | - |
|---|
| Start bp | 726082 |
|---|
| End bp | 726690 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643381943 |
|---|
| Product | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase |
|---|
| Protein accession | YP_002264981 |
|---|
| Protein GI | 209809443 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
|---|
| TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.38662 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTA TTGAACAACG ATTGAAAGAA ATAAAAATTG TCCCAGTTAT TGCGATTAAC
AGTGCAGAAC AAGCCTTGCC ATTAGCTAAA GTGCTTATGG ACAATGGATT ACCTTGTGCT
GAAGTGACGT TTAGAACAGA AGCCGCCGTT GAATCAATTC GTTTAATGCG TGAAGCGTAT
CCTGATATGT TGATTGGCGC AGGTACCGTA TTAACCGCTG CACAAGTTGA TCAAGCAATT
GAAGCCGGCG TTGATTTTGT TGTGAGCCCT GGGTTCAATC CAACAACGGT AAAATATTGT
CAACAACGTA ATATGCCGAT CATCCCTGGA GTAAATAATC CAAGCTTAGT CGAGCAAGCA
ATGGAAATGG GACTAAAGAC ATTAAAATTC TTCCCAGCAG AACCATCTGG TGGCATTCCA
ATGCTAAAAG CATTGACGGC GGTTTATCCT GTTAACTTTA TGCCTACTGG CGGAGTGAGC
CCAAGTAATG TAAATGATTA TTTGGATATT AAATCGGTTG TTGCTTGCGG TGGTACATGG
ATGGTACCGA CAGATTTAAT GGATAAGGGT GATTGGGATA GTATTGCCGA ATTAATTAAA
TCTCTATAA
|
|---|
| Protein sequence | MKTIEQRLKE IKIVPVIAIN SAEQALPLAK VLMDNGLPCA EVTFRTEAAV ESIRLMREAY
PDMLIGAGTV LTAAQVDQAI EAGVDFVVSP GFNPTTVKYC QQRNMPIIPG VNNPSLVEQA
MEMGLKTLKF FPAEPSGGIP MLKALTAVYP VNFMPTGGVS PSNVNDYLDI KSVVACGGTW
MVPTDLMDKG DWDSIAELIK SL
|
|---|
| |