Gene VSAL_II0662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0662 
Symbol 
ID6962049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand
Start bp724246 
End bp725046 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content36% 
IMG OID643381941 
Productputative signaling protein 
Protein accessionYP_002264979 
Protein GI209809441 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.260634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATTAG TCACTCAGGA GCAATTTGAA GGGTATTTAT TTTTGGGCGA GGATGGTTCA 
TTCTATTCAA AATATGAAGA ATATTTATTG CAAAGCGTAT TTCAGCCTAT CTTTAATGTT
AACCGACAAG CGATTGGTTA TGAAGCTTTA TTACGTATCT ATGATGTAAA CATGCTCTCT
ATAAGACCTG ATTTATTCTT TAAGGACACC ACTAAAACTA TCGAGCAAAA ACTAAACATC
GAACGCCTTA GTCGTATTAT TCATATCCGT AATTTTGCCC TCTTCTCCCA AAGCGATAGC
TTACTTTTTC TTAATATCTT GCCCGAATCA GCAATCCATT TTCACGCTGA TAAGATACCA
AACATGAACA CTTCTTTACT TGAATATCGA ATTAAACATT TAGGACTTTC CCCACAACAA
GTCACTCTTG AATTACTCGA GTTTCATTAT AATGATGAAG AAAAATTACG TTCAGCAATA
GAAAACATAA AATCGCACGG ATTTAATGTC GCTATTGACG ACTTTGGTTC AGAAGCTTCT
TGCGAGCATC GAGTTTCTCT TTTAAAACCA AGTATTTTAA AAATCGACCG AACGCTTTTG
ATAAAATATG AGGAAGGAAA TACATTCCCC TTGTTGTCTG CTATCCAACT CGCCAAAAAA
GAGAATGTAT TAATTGTGAT TGAAGGCGTA GAAACACTAG CCCAATACAC ACAGATGAAA
ACCTTGAACA TTGATTATTT TCAAGGTTTT CATTTGGGCA AGCCTCTGCC ACTACAGCAG
CAAACGCATA AAGCCGCATA G
 
Protein sequence
MLLVTQEQFE GYLFLGEDGS FYSKYEEYLL QSVFQPIFNV NRQAIGYEAL LRIYDVNMLS 
IRPDLFFKDT TKTIEQKLNI ERLSRIIHIR NFALFSQSDS LLFLNILPES AIHFHADKIP
NMNTSLLEYR IKHLGLSPQQ VTLELLEFHY NDEEKLRSAI ENIKSHGFNV AIDDFGSEAS
CEHRVSLLKP SILKIDRTLL IKYEEGNTFP LLSAIQLAKK ENVLIVIEGV ETLAQYTQMK
TLNIDYFQGF HLGKPLPLQQ QTHKAA