Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0662 |
Symbol | |
ID | 6962049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 724246 |
End bp | 725046 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643381941 |
Product | putative signaling protein |
Protein accession | YP_002264979 |
Protein GI | 209809441 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.260634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATTAG TCACTCAGGA GCAATTTGAA GGGTATTTAT TTTTGGGCGA GGATGGTTCA TTCTATTCAA AATATGAAGA ATATTTATTG CAAAGCGTAT TTCAGCCTAT CTTTAATGTT AACCGACAAG CGATTGGTTA TGAAGCTTTA TTACGTATCT ATGATGTAAA CATGCTCTCT ATAAGACCTG ATTTATTCTT TAAGGACACC ACTAAAACTA TCGAGCAAAA ACTAAACATC GAACGCCTTA GTCGTATTAT TCATATCCGT AATTTTGCCC TCTTCTCCCA AAGCGATAGC TTACTTTTTC TTAATATCTT GCCCGAATCA GCAATCCATT TTCACGCTGA TAAGATACCA AACATGAACA CTTCTTTACT TGAATATCGA ATTAAACATT TAGGACTTTC CCCACAACAA GTCACTCTTG AATTACTCGA GTTTCATTAT AATGATGAAG AAAAATTACG TTCAGCAATA GAAAACATAA AATCGCACGG ATTTAATGTC GCTATTGACG ACTTTGGTTC AGAAGCTTCT TGCGAGCATC GAGTTTCTCT TTTAAAACCA AGTATTTTAA AAATCGACCG AACGCTTTTG ATAAAATATG AGGAAGGAAA TACATTCCCC TTGTTGTCTG CTATCCAACT CGCCAAAAAA GAGAATGTAT TAATTGTGAT TGAAGGCGTA GAAACACTAG CCCAATACAC ACAGATGAAA ACCTTGAACA TTGATTATTT TCAAGGTTTT CATTTGGGCA AGCCTCTGCC ACTACAGCAG CAAACGCATA AAGCCGCATA G
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Protein sequence | MLLVTQEQFE GYLFLGEDGS FYSKYEEYLL QSVFQPIFNV NRQAIGYEAL LRIYDVNMLS IRPDLFFKDT TKTIEQKLNI ERLSRIIHIR NFALFSQSDS LLFLNILPES AIHFHADKIP NMNTSLLEYR IKHLGLSPQQ VTLELLEFHY NDEEKLRSAI ENIKSHGFNV AIDDFGSEAS CEHRVSLLKP SILKIDRTLL IKYEEGNTFP LLSAIQLAKK ENVLIVIEGV ETLAQYTQMK TLNIDYFQGF HLGKPLPLQQ QTHKAA
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