| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0618 |
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| Symbol | |
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| ID | 6962010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 669896 |
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| End bp | 670876 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643381903 |
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| Product | putative secretion protein, HlyD family |
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| Protein accession | YP_002264941 |
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| Protein GI | 209809403 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAG CAACTAACGT TATCGGTTCT CTTATTGCCG TCTCAGTGGT CTCTTGGGTT
GGATACAGCT TTTGGGCAGC TTATCAGCCT CGTCCAGAGT TACTACAAGG TCAAATTGAA
GCGGAGCAAT ACAATGTTTC TTCAAAAGTC CCTGGGCGTA TTGAAAGTGT TTTTGTAAAA
AAAGGCGATG AAATAGAAAA AGGCCAAGCA GTTTTCTCTC TTTACAGTCC TGAAATAGAG
GCAAAATTGG CTCAAGCAAA AGCGGGGGAA GCCGCCGCAA GTGCATTAGC TCAAGAAGCG
GAAAAAGGAG CAAGAAAACA ACAAATATCG GCAGCTCGTG ATCAGTGGAG AAAAGCGAAA
GCAGCGAACC AACTATTAGA GAAAACATAC GCTCGTGTAA ATAACCTTTA CAACGATGGT
GTGGTTGCTG AACAAAAGAA AGATGAAACA TACACTCAAT GGCAAGCCGC TAAATACACT
GAAAATGCAG CATACCAAAT GTATCAAATG GCAAAAGAAG GGGCTCGAGT AGAAACAAAA
CGAGCCGCTA ATGAAAAAGT AAAAATGGCC TCTGGTGCGG TTGCTGAAGT TGAAGCTTAT
GCCGCAGATA CCAAAATAAA CAGTTGGTAT GAAGGAGAGG TGTCACAAGT CTTACTAAAC
GCTGGAGAGA TTGCGCCTCA AGGGTTTCCT GTTGTGACGG TTATTGACAT GAATAATGCG
TGGGCTATTT TTCATGTAAG AGAAGATAAC CTAAAGCACT ATAACAAAGG TGATGAGTTG
TCGGTTTATC TACCAGCCCT TGATGCGACG GTTCCTTTTA CCATTACTCA TATTTCTGTA
TTAGGGGATT ATGCGACTTG GCGTGCAACG GATAACAGTC AAGGATTTGA TTTGAAAACA
TTTGAAGTTG AAGCGCATCC AACGAAAAAA ATACCAAATC TAAGAGTAGG TATGAGTGCT
ATTGTTCGAA TTGAAAAGTA A
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| Protein sequence | MSKATNVIGS LIAVSVVSWV GYSFWAAYQP RPELLQGQIE AEQYNVSSKV PGRIESVFVK
KGDEIEKGQA VFSLYSPEIE AKLAQAKAGE AAASALAQEA EKGARKQQIS AARDQWRKAK
AANQLLEKTY ARVNNLYNDG VVAEQKKDET YTQWQAAKYT ENAAYQMYQM AKEGARVETK
RAANEKVKMA SGAVAEVEAY AADTKINSWY EGEVSQVLLN AGEIAPQGFP VVTVIDMNNA
WAIFHVREDN LKHYNKGDEL SVYLPALDAT VPFTITHISV LGDYATWRAT DNSQGFDLKT
FEVEAHPTKK IPNLRVGMSA IVRIEK
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