Gene VSAL_II0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0605 
Symbol 
ID6961999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand
Start bp660232 
End bp660897 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content40% 
IMG OID643381892 
Producthypothetical protein 
Protein accessionYP_002264930 
Protein GI209809392 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.209579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAT TCAATCAAAC CGAGATCCGC ATTATAGGTT GCCTTATCGA GAAAGAGGTT 
ACCACCCCTG AGCAATATCC ATTAACACTG AATGCACTAA CAACAGCATG TAATCAAAAA
AGCAACCGTG ACCCTGTCAC ATCGATGTCT GATTCGGATG TTTTAGATAG TTTAAATACA
TTAGTGTCAG AACGTGTGGT TACGGATGAA ACTCGTGGAA ATTCAAGAGT GGCAAAATAC
CAACATCGTT TCTGTAATAC GGAGTTTGGT AGTTTAAAAT TGTCAAAACA AGAAATGGCT
GTATTGTGCG TTCTTTTTTT ACGCGGACCT CAAACACCAG GGGAACTGCG TACTCGAACC
CAACGTTTAT GTGAGTTTGA TAATGTCGCA GAAGTCGAGT CCGTATTAAC GACATTAGGC
TTAAGTGAAG CATCGCCAAT GGTGACTAAG TTAGAAAAAG AACCAGGTAA GAGAGAAGCA
CGCTATGCCC ATTTATTTTG TGGTGAGGTT ATTAATGATG TCACTGTTGT TGATAAAACA
AACGTGACTA ACCATTCAAA CTCAACAGAG AATGATGAGC GCATCACTTT GTTAGAATCT
GAAGTTGCGG AGCTAAAAGC CGAAATGGCT CAGCTGACTC AACTAGTTAA TGATTTATTA
GCATAA
 
Protein sequence
MRIFNQTEIR IIGCLIEKEV TTPEQYPLTL NALTTACNQK SNRDPVTSMS DSDVLDSLNT 
LVSERVVTDE TRGNSRVAKY QHRFCNTEFG SLKLSKQEMA VLCVLFLRGP QTPGELRTRT
QRLCEFDNVA EVESVLTTLG LSEASPMVTK LEKEPGKREA RYAHLFCGEV INDVTVVDKT
NVTNHSNSTE NDERITLLES EVAELKAEMA QLTQLVNDLL A