Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0605 |
Symbol | |
ID | 6961999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 660232 |
End bp | 660897 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643381892 |
Product | hypothetical protein |
Protein accession | YP_002264930 |
Protein GI | 209809392 |
COG category | [S] Function unknown |
COG ID | [COG3132] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.209579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATAT TCAATCAAAC CGAGATCCGC ATTATAGGTT GCCTTATCGA GAAAGAGGTT ACCACCCCTG AGCAATATCC ATTAACACTG AATGCACTAA CAACAGCATG TAATCAAAAA AGCAACCGTG ACCCTGTCAC ATCGATGTCT GATTCGGATG TTTTAGATAG TTTAAATACA TTAGTGTCAG AACGTGTGGT TACGGATGAA ACTCGTGGAA ATTCAAGAGT GGCAAAATAC CAACATCGTT TCTGTAATAC GGAGTTTGGT AGTTTAAAAT TGTCAAAACA AGAAATGGCT GTATTGTGCG TTCTTTTTTT ACGCGGACCT CAAACACCAG GGGAACTGCG TACTCGAACC CAACGTTTAT GTGAGTTTGA TAATGTCGCA GAAGTCGAGT CCGTATTAAC GACATTAGGC TTAAGTGAAG CATCGCCAAT GGTGACTAAG TTAGAAAAAG AACCAGGTAA GAGAGAAGCA CGCTATGCCC ATTTATTTTG TGGTGAGGTT ATTAATGATG TCACTGTTGT TGATAAAACA AACGTGACTA ACCATTCAAA CTCAACAGAG AATGATGAGC GCATCACTTT GTTAGAATCT GAAGTTGCGG AGCTAAAAGC CGAAATGGCT CAGCTGACTC AACTAGTTAA TGATTTATTA GCATAA
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Protein sequence | MRIFNQTEIR IIGCLIEKEV TTPEQYPLTL NALTTACNQK SNRDPVTSMS DSDVLDSLNT LVSERVVTDE TRGNSRVAKY QHRFCNTEFG SLKLSKQEMA VLCVLFLRGP QTPGELRTRT QRLCEFDNVA EVESVLTTLG LSEASPMVTK LEKEPGKREA RYAHLFCGEV INDVTVVDKT NVTNHSNSTE NDERITLLES EVAELKAEMA QLTQLVNDLL A
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