Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0497 |
Symbol | |
ID | 6961911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 555892 |
End bp | 556572 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643381789 |
Product | hypothetical protein |
Protein accession | YP_002264827 |
Protein GI | 209809289 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.628892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGTTG TCGATTTTCT GAAGCATAAG CGTGAATATC TGGCGAAACA TCCATTTGAA TTAAAAGACT GGATGTCACC AACCATTAAG GATTACTGGA TTGAGTTTTT ACAAAAAGCC AATAATATTC ACATTATTTC TTGGGTGAAA GAGCACAAGC GTACCGTTAA TAGTACGCAA GAAGCTATTC AACCAGAGCC TGTTGAGATG AATGCAGATA CACAAGCACT ATACGAAGAA CTGACTGCGC AACTAGGTGA TGAAATTCAC GTAGGCAGTT GGTCTGTAAT GGATCAAGAA CGTATCAATA ATTTTGGTGC TGTTACAGAA GATCCACAAT GGATTCATAC CGATCCAGAA AGAGCCGCCG CAGAATCACC TTTTAAAACC ACTATTGCAC ATGGCTTTTT AACATTATCA ATGTTGTCTA AGATGACCGA TAATGTAGGT AATGATAATT TACTTTTCCC TACTGCTAAA ATGACGGTGA ATTACGGATT AAACAAAGTT CGTTTCCCAT ACCCAGTAAA AGCAGGTAAG CGTATTCGTT CAAGGAGCAC ACTGCTATCA GTGACGCCGA TTAAACGTGG CTTAGAAATT GAAACAGAAG TAAAAGTTGA GATCGAGAAA TGTCGCCGCC CAGGGTGTGT TGCTGTTTCG GTGATCCGTT TATATTTCTA A
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Protein sequence | MKVVDFLKHK REYLAKHPFE LKDWMSPTIK DYWIEFLQKA NNIHIISWVK EHKRTVNSTQ EAIQPEPVEM NADTQALYEE LTAQLGDEIH VGSWSVMDQE RINNFGAVTE DPQWIHTDPE RAAAESPFKT TIAHGFLTLS MLSKMTDNVG NDNLLFPTAK MTVNYGLNKV RFPYPVKAGK RIRSRSTLLS VTPIKRGLEI ETEVKVEIEK CRRPGCVAVS VIRLYF
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