Gene VSAL_II0492 details

Gene Information

• Locus tag: VSAL_II0492
• Symbol: thiE
• ID: 6962604
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011313
• Strand: +
• Start bp: 550113
• End bp: 550733
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643381785
• Product: thiamine-phosphate pyrophosphorylase
• Protein accession: YP_002264823
• Protein GI: 209809285
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0352] Thiamine monophosphate synthase
• TIGRFAM ID: [TIGR00693] thiamine-phosphate pyrophosphorylase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAACC CTTATAAACT GTATTTGGTG ACAGATGACA AGCAAGATAT AGACACCTTA 
TGTAATGTAG TAAAAGAGGC AGTTAAAGGA GGTGTCACCA TGGTACAGAT CCGTGAAAAA 
CACGGAGATA TACGCGCATT TATTGAACGT TCAATTGCAG TAAAGAATGT ATTAAAAGAC 
AGTGGTGTAC CATTAATCAT AAATGATCGT GTTGATGTGG CATTGGCGGT GAGAGCGGAT 
GGAGTGCATT TAGGTCAATC CGATATGCCT GCAAACCTTG CTCGCCAATT GATTGGCCCT 
GATATGATTT TAGGGTTGTC TGTTGAAAAT GAAACGCAGT TGCGTGAAGC GCAAGATCTA 
CCTGTTGATT ACCTTGGTAT CAGTGCGATA TTTTCTACGC CAACTAAGAC TAATATTATT 
AAAGAGTGGG GCATTGACGG TTTAACGAAA GCCGTTAAAG AAAGTAAACT TCCTCTTGTG 
GCTATTGGTG GCATTAACGA AACGAACATT AAGAAAGTAG CAGATACTCA AGTGGATGGT 
ATTGCTTTAG TGTCGGCAAT TTGCCATGCA ACATCGCCAA AGCAGGCAAG TGAAGGGTTA 
CTTGAATTGA TGGGACGTTA A 

 

Protein sequence

MNNPYKLYLV TDDKQDIDTL CNVVKEAVKG GVTMVQIREK HGDIRAFIER SIAVKNVLKD 
SGVPLIINDR VDVALAVRAD GVHLGQSDMP ANLARQLIGP DMILGLSVEN ETQLREAQDL 
PVDYLGISAI FSTPTKTNII KEWGIDGLTK AVKESKLPLV AIGGINETNI KKVADTQVDG 
IALVSAICHA TSPKQASEGL LELMGR