Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0447 |
Symbol | |
ID | 6961878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 506784 |
End bp | 507530 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643381740 |
Product | amino acid transporter ATP-binding protein |
Protein accession | YP_002264780 |
Protein GI | 209809242 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0253286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCCGTC AAAATACACA GACTAACTCC GTGATTACTT TTAAACACGT AGAAAAGTAT TATGATCAAT TCCATGCTTT AAAAAACATT AACCTCTCTA TCGCTCAAGG CGAAAAAGTG GTTATATGCG GCCCTTCTGG TTCTGGTAAA TCCACTCTGA TCCGCTGTAT TAATACGCTA GAATCCATTG AATCTGGAGA GTTATCTGTT TTTGGTCAAA CCGTGTCAAC AAAGCAGCAG TCTAAAGGTC AAATTGGCAT GGTGTTTCAA CATTTCAATT TATTCCCACA TTTAACGATA TTAGAAAACC TGACACTAGC ACCCATCAAA ACCTTAAAAC TCTCTAAAGC TGAAGCCAAT AAACGTGCCT TGCATTATTT AGAGCGCGTT AACATTGCAG AGCAGGCGAA TAAATTCCCC TCTCAGCTCT CGGGTGGTCA GCAGCAACGT GTCGCCATTG CTCGCTCATT GTGCATGGAA CCGAAAATTC TGTTATTTGA TGAACCAACT TCCGCGTTAG ATCCTGAAAT GATCAGTGAA GTCTTAGATG TTATGTCAAA TCTGGCAAAA GACGGCATGA CCATGGTCTG CGTTACTCAT GAAATGGGAT TTGCTAAAAA AGTGGCTGAC CGTGTTGTTT TTATGGATGA AGGTGAGATT ATTGAAATCG CCGAACCAAA TGAATTTTTT GAACACCCAA AACATCATCG TACTCAAACG TTTTTAAACC AAATCTTGAG CTACTAA
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Protein sequence | MSRQNTQTNS VITFKHVEKY YDQFHALKNI NLSIAQGEKV VICGPSGSGK STLIRCINTL ESIESGELSV FGQTVSTKQQ SKGQIGMVFQ HFNLFPHLTI LENLTLAPIK TLKLSKAEAN KRALHYLERV NIAEQANKFP SQLSGGQQQR VAIARSLCME PKILLFDEPT SALDPEMISE VLDVMSNLAK DGMTMVCVTH EMGFAKKVAD RVVFMDEGEI IEIAEPNEFF EHPKHHRTQT FLNQILSY
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