Gene VSAL_II0447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0447 
Symbol 
ID6961878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand
Start bp506784 
End bp507530 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content40% 
IMG OID643381740 
Productamino acid transporter ATP-binding protein 
Protein accessionYP_002264780 
Protein GI209809242 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0253286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCGTC AAAATACACA GACTAACTCC GTGATTACTT TTAAACACGT AGAAAAGTAT 
TATGATCAAT TCCATGCTTT AAAAAACATT AACCTCTCTA TCGCTCAAGG CGAAAAAGTG
GTTATATGCG GCCCTTCTGG TTCTGGTAAA TCCACTCTGA TCCGCTGTAT TAATACGCTA
GAATCCATTG AATCTGGAGA GTTATCTGTT TTTGGTCAAA CCGTGTCAAC AAAGCAGCAG
TCTAAAGGTC AAATTGGCAT GGTGTTTCAA CATTTCAATT TATTCCCACA TTTAACGATA
TTAGAAAACC TGACACTAGC ACCCATCAAA ACCTTAAAAC TCTCTAAAGC TGAAGCCAAT
AAACGTGCCT TGCATTATTT AGAGCGCGTT AACATTGCAG AGCAGGCGAA TAAATTCCCC
TCTCAGCTCT CGGGTGGTCA GCAGCAACGT GTCGCCATTG CTCGCTCATT GTGCATGGAA
CCGAAAATTC TGTTATTTGA TGAACCAACT TCCGCGTTAG ATCCTGAAAT GATCAGTGAA
GTCTTAGATG TTATGTCAAA TCTGGCAAAA GACGGCATGA CCATGGTCTG CGTTACTCAT
GAAATGGGAT TTGCTAAAAA AGTGGCTGAC CGTGTTGTTT TTATGGATGA AGGTGAGATT
ATTGAAATCG CCGAACCAAA TGAATTTTTT GAACACCCAA AACATCATCG TACTCAAACG
TTTTTAAACC AAATCTTGAG CTACTAA
 
Protein sequence
MSRQNTQTNS VITFKHVEKY YDQFHALKNI NLSIAQGEKV VICGPSGSGK STLIRCINTL 
ESIESGELSV FGQTVSTKQQ SKGQIGMVFQ HFNLFPHLTI LENLTLAPIK TLKLSKAEAN
KRALHYLERV NIAEQANKFP SQLSGGQQQR VAIARSLCME PKILLFDEPT SALDPEMISE
VLDVMSNLAK DGMTMVCVTH EMGFAKKVAD RVVFMDEGEI IEIAEPNEFF EHPKHHRTQT
FLNQILSY