| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0427 |
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| Symbol | |
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| ID | 6962418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 480174 |
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| End bp | 481196 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643381722 |
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| Product | putative outer membrane pore protein |
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| Protein accession | YP_002264762 |
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| Protein GI | 209809224 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA AATTATTGGC ATTAGCTATT ATCGCTGCAT CATCTAACGC AGTGGCTGTT
GAACTTTATA ATGAAGAAGG CACAACATTT GATATTGGTG GTCACGTATC TGTTGCTTTA
GAAGGTTCTG ATGAAGGCAA TACTGATGTA ACTTCTGTCT CTCCACGTAT TAATTTTAAT
GCAACGCATG ATCTTGGTAA TGGTTTTGTT GCTGATGCAA AAGGTGAATG GGCTCTTAAT
TATTTAGATG GTGGTGAAAA TGCATTCACG ACTCGTTTAG GTTACATCGG TTTGACGCAT
GAAGAATTTG GCCGAGCTGT TGCGGGTACG CAATGGTCAC CTTATTACAG TGTTGGTGGT
GTTGCTGATT TACCAATTGC ATTTGCCAAC GAATTTCTTT ATGAAGACCA AGGTAACTTA
GGTACGGCTC GTGCAGATAA AATGTTGAGC TATGGAAAAG CGTTTGAATT GGGTGATGCA
GGTAAATTAG CATTGGCTGC TGGTTGGCAG GGACGTAAAA CAGATACGCC TGACAATTCA
ATTGTTGAGA ACGATTACGG TAACCGTGCT CAAATCGCAT TGAATTATAA TGTTGCTGGT
TTCTCTGCAA ACTATGCATA CAACACAGGC GATGTAGATT ACGGTTTGAA ATCAGAAACA
TCTGAGTCTC ATATATTGAG TGCCACTTAT GGTCAATATG GTTCAGGCTT ATATGTTGCT
GGTGTATATG CAATGAATGA GAATATGAAC AGTGATGCTA ATGGTATCTT GATTGAAGAT
GGTTCAGCAT ACGAAGCTTT GGTTGCTTAC GCTTTAGATA ACAGTTTAAA CCTTAGCTTA
AATTATGAAT CAGTCGTTGA TAATGACGCA AGTAAAACAG TATATAGCAC TACGGCTATT
CAAGCGGAAT ACAACTTTAC TGATAAATTT GTAGGCTTTA CTGGTTATCA ATTAGATCTT
GGTAATGATT ATAATGAGAC AGAAGACAAC AAGTGGATGT TAGGTGCTCG TTACTACCTA
TAA
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| Protein sequence | MNKKLLALAI IAASSNAVAV ELYNEEGTTF DIGGHVSVAL EGSDEGNTDV TSVSPRINFN
ATHDLGNGFV ADAKGEWALN YLDGGENAFT TRLGYIGLTH EEFGRAVAGT QWSPYYSVGG
VADLPIAFAN EFLYEDQGNL GTARADKMLS YGKAFELGDA GKLALAAGWQ GRKTDTPDNS
IVENDYGNRA QIALNYNVAG FSANYAYNTG DVDYGLKSET SESHILSATY GQYGSGLYVA
GVYAMNENMN SDANGILIED GSAYEALVAY ALDNSLNLSL NYESVVDNDA SKTVYSTTAI
QAEYNFTDKF VGFTGYQLDL GNDYNETEDN KWMLGARYYL
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