| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0393x |
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| Symbol | |
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| ID | 7072199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 436664 |
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| End bp | 439495 |
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| Gene Length | 2832 bp |
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| Protein Length | 943 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643381688 |
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| Product | response regulator, histidine kinase |
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| Protein accession | YP_002264730 |
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| Protein GI | 209809192 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.621999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATATTAA TTAATACGAA CAAACTCAGT CTTATATTGA TCGCATTTAT TACCTGTGCT
GCTCTGTATT TGTCGTTGAT TGTCACCAAA AGTCATTTGG TCGAACAATA TCAACGTGCT
TATTTATCAT TGTCTGACAA CATCATTCAA TCTAGAGAAA GTCTCTATTA TTTTAATCAT
CAAGACAATA AAGCCTATGA CTCTTACTCA TCTCAGCTGG TCAATGCCGA TCTAAAAGCC
TCTTTCCTTT CTGAACACTT AGACAATGAC CAAAACCATT GGTTATCAAG TTTTCTCATT
AGTAGTGATC AAGCCGTTAT TTATGCAAAA AACACTCAAG TAAGCGTCTC GACCTTAGTT
AACGATCTAG AAACACTATT GAGATTAAAA GTCTCATACG AGTATTCAAC ACTAACTGCC
TTACTATTAG AAAAAAAACT ATTAACTACC CTACCAAAAC TAGAAGATAA ACTGTATGTC
TCACAATTTA CATTAACGGG TTTAATGAGC TCTCCGCCCA GTAATGAATT AAAAAACCAA
GTTGGGTTTA AAAGCTTATC TAATTACATC GCCTTTCGTG AACGTATTAA AGTCGAAAGT
AAAAACAAAG AAAAAGACAT TTTTACCAAC AATGTAAAAC AAATGCTGAC ACAGAAAAAT
AATTATTGGT TATCTCAATC CGAATCAATA AAGAATCATA TGTTCATTAC CGTTATACTA
TTTATCTGCG CGATTGCCGC CTACTTCTAT CTTCAATTAC GTGAACGGTT ACAACAAACC
TTAATTATAA AAAGAGAACT GGTAAACTCA GAAAAAGAAA AATCGAAGCT TGCCCTTGTT
GCCGAGCATG CACACGATGC CATTCTTATT ACCGACAACA ATGGCATGTT AACATGGGCA
AACCAAAGTT TTTCTACACT CTCAGGCTTC CAACTCAATG AAGTACTAGG AAAGAAACCA
GGAGATCTCT TACAGGGAGA AAACACCTCA AAAGACGACA TTGCACGCAT CTCTGCCGCC
ATCAAAAAAG GGGCCGCGAT TGAATCAGAA TTAATCAATT ATCATAAAGA CGGCTCAGAG
TACTGGATAG GTATGTCCAT TACCCCCACC TTTAATTCTG ATGGCTCAGT AGAGCAGTTC
ATTGCGGTAG AAAGAGACAT CACCAAGCGT AAAGCCCTTG AAATTGATTT ATTCAATGCA
GCAGAACAAG CGGAAGTATC CAACAAAGCC AAATCAACTT TCTTAGCAAC CATGAGTCAT
GAATTAAGAA CGCCACTTAA CGGTATTTTA GGCATGGCAC AAATCATCGA AAGTAATATA
AAAGATCCCG AACAACACAA ACAGATTAAC GTTCTACTCG AATCAGGAGA TCACCTACTT
TCTTTACTTA ATGACATTCT TGATTTCTCT AAAATTGAAC AAAATAAACT GGAATTAGAT
AACCTTCCTT TTGATTTTAA AGATGTGATT AGTCCTATTG CAAATACCTA CATCCCGATC
TGTGAAGATA AAGGATTAGA ATTAATTATC CATGACCAGA TTAATGCGGG TGCCGTATTT
AATGGTGACA AACCTCGAAT TCGACAAATC ATCTTCAACT TAATCAGTAA TGCCGTAAAG
TTCACCCATA AAGGCAGTAT CACATTAACC TTCAGTCACA CCCTTACCGC AAAAAGTAAA
CAAGGTCTGC TTATCAAAAT AGAAGACAGT GGTATTGGCA TACGCGAAGA GCGGCTTGAC
TATATCTTTG ATCCTTTCAT TCAAGCAGAA TCAGCAACAA CACGACAATA TGGTGGAACC
GGGTTAGGCT TGGCGATAGT GAAACAACTC GTTGATGCTA TGCAAGGTTA TATTTCAGTA
AAAAGCGTTG AAGGAGAAGG CACTGGCTTT ACTATTATGC TGCCACTTGA AACCGTTATA
AAAAAACAAA TTCACAAAGA AAAAATTCCC GAAGCGCTTA TCTCTAATGA CAATGAAGAA
CTCGTCCATC AAAAATTATC GATTTTAGTC GCCGAAGACA ATAAAGTGAA TGCTCTGGTC
GCCAAAATGT TTTGTGAGCG TTTGGGGCAT CAAGTCGTCG TTGTCGAAAA TGGACAGCTT
GCAATAGAAG CCTTAAGGTT ACAGGTATTT GATCTGATCA TTATGGATAA TCACATGCCG
ATCATGGACG GTATTAGCGC AACAAAGATC ATCAGAAAAG AGCTTAAACT GCCCACCGTT
ATTTTTGCCT GTACCGCCGA TGTATTCCAA GAAGCCCATG ATAATTTCAT TGAAGCGGGC
GCAAACTACG TATTAACGAA GCCTCTTCAA GAACAAGGAT TTATGGATGC AATAAAACAA
CATCAACAGT TAATTACTCG TAATAATACA GAAACCAAAC CATTCGATAA ATCGACTGAA
AATGTCATCG AATTAAAACG TCATTCAAAA GAAAAAATAA CGACATTAGC ACTCACCGAA
GCCGAGTTAA GCTTAGTATC ATTAATTGCT ATTTGTGGTG ACGATAATGA TATTTTAGAT
GAGTTCTTAC TGTCATTTAT TGATATCTCC GAAGAGAGCA TTACTTCATT AATCACCGCT
TATGACAATA AAGAAATTGC AAATATTCGC TTACATTCCC ATTCAGTAAA AGGAATGGCA
AGTAACTTTG ATGCACTCCG CCTTGTTGAA AGCGCAACAT CCATTGAAAT GTTGACGAAA
GTAGGTTTAA TGCCTGAACT GAATGACATA CAACAACTTA TCAATTTGTT AGAAGTAAAC
ATTCAACAAG CTGTCCGTTT ATTACACAGA AATATCAATA AAAAAACAAA TAATGTTCAT
GTTTATCCGT AA
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| Protein sequence | MILINTNKLS LILIAFITCA ALYLSLIVTK SHLVEQYQRA YLSLSDNIIQ SRESLYYFNH
QDNKAYDSYS SQLVNADLKA SFLSEHLDND QNHWLSSFLI SSDQAVIYAK NTQVSVSTLV
NDLETLLRLK VSYEYSTLTA LLLEKKLLTT LPKLEDKLYV SQFTLTGLMS SPPSNELKNQ
VGFKSLSNYI AFRERIKVES KNKEKDIFTN NVKQMLTQKN NYWLSQSESI KNHMFITVIL
FICAIAAYFY LQLRERLQQT LIIKRELVNS EKEKSKLALV AEHAHDAILI TDNNGMLTWA
NQSFSTLSGF QLNEVLGKKP GDLLQGENTS KDDIARISAA IKKGAAIESE LINYHKDGSE
YWIGMSITPT FNSDGSVEQF IAVERDITKR KALEIDLFNA AEQAEVSNKA KSTFLATMSH
ELRTPLNGIL GMAQIIESNI KDPEQHKQIN VLLESGDHLL SLLNDILDFS KIEQNKLELD
NLPFDFKDVI SPIANTYIPI CEDKGLELII HDQINAGAVF NGDKPRIRQI IFNLISNAVK
FTHKGSITLT FSHTLTAKSK QGLLIKIEDS GIGIREERLD YIFDPFIQAE SATTRQYGGT
GLGLAIVKQL VDAMQGYISV KSVEGEGTGF TIMLPLETVI KKQIHKEKIP EALISNDNEE
LVHQKLSILV AEDNKVNALV AKMFCERLGH QVVVVENGQL AIEALRLQVF DLIIMDNHMP
IMDGISATKI IRKELKLPTV IFACTADVFQ EAHDNFIEAG ANYVLTKPLQ EQGFMDAIKQ
HQQLITRNNT ETKPFDKSTE NVIELKRHSK EKITTLALTE AELSLVSLIA ICGDDNDILD
EFLLSFIDIS EESITSLITA YDNKEIANIR LHSHSVKGMA SNFDALRLVE SATSIEMLTK
VGLMPELNDI QQLINLLEVN IQQAVRLLHR NINKKTNNVH VYP
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