| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0385 |
|---|
| Symbol | glpK |
|---|
| ID | 6962475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011313 |
|---|
| Strand | + |
|---|
| Start bp | 427043 |
|---|
| End bp | 428557 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643381681 |
|---|
| Product | glycerol kinase |
|---|
| Protein accession | YP_002264723 |
|---|
| Protein GI | 209809185 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0554] Glycerol kinase |
|---|
| TIGRFAM ID | [TIGR01311] glycerol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAGC AAAAATACAT TGTTGCACTT GACCAAGGAA CTACTAGCTC TCGTGCCGTC
ATTCTTGACC ACGATGCCAA TATTGTCAGT GTTTCTCAGC GTGAATTTAC TCAGATTTAT
CCTCAAGCAG GATGGGTTGA GCATGATCCA CTAGAAATCT ACGCAACACA AAGTTCGACG
TTAGTTGAAA CCTTAGCGAA AGCAGGTATT CGCAGTGATC AAATTGCGGC GATTGGTATT
ACGAATCAAC GTGAAACGAC GATAGTTTGG AATAAAGAAA CGGGTAAACC AGTCTATAAC
GCGATTGTTT GGCAGTGTCG TCGTACGGCA GATACATGTG AAAAACTGAA AGAAGCAGGT
CTTGAAGAAT ACATCCGTGA AAATACGGGT TTGGTTGTTG ACCCATATTT CTCTGGTACA
AAAATTAAGT GGATTTTAGA TAACGTTGAA GGCGCTCGTG AAGACGCTGA AGCGGGTAAG
TTATTGTTTG GTACGGTTGA TACCTGGCTT GTGTGGAAGA TGACACAAGG ACGCGTTCAC
GTGACTGATT ACACCAATGC ATCACGTACC ATGGTCTTTA ATATCAATAC GCTTCAGTGG
GATGAAAAAC TGCTGAAAGA GCTAGATATT CCACTTTCAA TGATGCCTGA AGTGAAATCG
TCATCAGAAG TGTACGGCGA AACAAACATT GGTGGTAAAG GCGGAACGCG TATTCCAATC
GCAGGTATTG CGGGGGATCA ACAAGCGGCG CTTTATGGTC AAATGTGTGT AGAGCAAGGC
CAAGCTAAGA ACACCTACGG TACGGGCTGT TTCTTACTAA TGAACACGGG TAAAGAGAAA
GTAACGTCTC GCAATGGCCT ATTAACGACA CTTGCTTGTG GTCCTCGTGG TGAAGCGTCT
TACGCACTGG AAGGTGCGGT ATTTATGGGC GGAGCGTCGA TTCAATGGCT ACGCGATGAA
ATGAAGCTAT TAGCGGATGC GAAAGATTCT GAGTATTTTG CAACGAAGGT TGATTCATCA
AACGGTGTTT ATGTGGTTCC AGCCTTTACA GGGTTAGGTG CTCCTTATTG GGATGCGTAT
GCACGTGGAA CCATTGTTGG CTTAACGCGT GGTTGTGGTT CAAATCATAT TATTCGTGCA
ACGTTAGAAA GTATTGCTTA TCAAACACGT GATGTGATTG ATGCAATGCA AGCAGATTCA
GGTATCAAGT TATCGGCACT TCGTGTTGAT GGTGGTGCGG TTGCTAATAA CTTCTTAATG
CAGTTCCAAG CGGATGTATT AGATGTAGCG GTTCATCGTC CACAAGTGAC AGAAGTGACT
GCGCTAGGTG CTGCTTATCT TGCTGGTTTA GCCGTTGGAT TCTGGGGTGG CCTTGATGAA
TTGGCAGGTA AAGCTGTGAT TGATCGTTCA TTTGAACCTC ATCATGATGA AATTAAACGT
AATCAACGTT ACCGTGGTTG GAAACGCGCA GTAAAATGTG CTCAATCATG GGCAGAGCTG
CACGATGAAG AGTAA
|
|---|
| Protein sequence | MTEQKYIVAL DQGTTSSRAV ILDHDANIVS VSQREFTQIY PQAGWVEHDP LEIYATQSST
LVETLAKAGI RSDQIAAIGI TNQRETTIVW NKETGKPVYN AIVWQCRRTA DTCEKLKEAG
LEEYIRENTG LVVDPYFSGT KIKWILDNVE GAREDAEAGK LLFGTVDTWL VWKMTQGRVH
VTDYTNASRT MVFNINTLQW DEKLLKELDI PLSMMPEVKS SSEVYGETNI GGKGGTRIPI
AGIAGDQQAA LYGQMCVEQG QAKNTYGTGC FLLMNTGKEK VTSRNGLLTT LACGPRGEAS
YALEGAVFMG GASIQWLRDE MKLLADAKDS EYFATKVDSS NGVYVVPAFT GLGAPYWDAY
ARGTIVGLTR GCGSNHIIRA TLESIAYQTR DVIDAMQADS GIKLSALRVD GGAVANNFLM
QFQADVLDVA VHRPQVTEVT ALGAAYLAGL AVGFWGGLDE LAGKAVIDRS FEPHHDEIKR
NQRYRGWKRA VKCAQSWAEL HDEE
|
|---|
| |