| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0361 |
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| Symbol | |
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| ID | 6961815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 405171 |
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| End bp | 406313 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643381658 |
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| Product | putative ABC transporter solute-binding protein |
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| Protein accession | YP_002264700 |
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| Protein GI | 209809162 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4134] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.083844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGT GGTTGTTATT GCTCAATAGC TTAATCTTTT CTTTTGGTGT GAATGCGACA
GATACATGGA AAGAAGTAGA ACAAAAAGCC AAAGGACAAA CGGTATACTT TCATGCTTGG
GGAGGAAGCC AAGAAATAAA TAACTACCTT CGTTGGGCAG ATAAAGAGTT GCAACGTGAT
TACGGAGTGA CACTAAAACA CGTTAAAGTT GCCGATATTG CAGAAAGTAC GTCTCGTCTT
ATTGCCGAAA AAACCGTAGG TAAAAATGAA GGTGGCAGTG TTGATATGGT ATGGATTAAT
GGTGAAAACT TTAAATCTAT GAAAAACAGT CAATTGCTTT TTGGTCCATT TGTTGATCGT
TTACCAAGTT GGAAATACGT AGATAAATCG TTGCCAATAG ACAGTGATTT TTCTGAGCCA
ACATTAGGAT TAGAAGCGCC ATGGGGGGTT GGTCAATTAG TTTTTATTCA CGATAAAGCG
ACATTAAATA ACCCGCCACA GTCTTTTTCT GAATTATTAA GTTACAGTAA GGCATTTCCT
AATCGAATTA CTTATCCTAA ACCTCCTGAA TTTCATGGCA CGAGCTTTTT AAAAGCACTG
CTAATTGAAT TGACCAATAA TAATCCTCAA TTAATGAAAC CAGTGGAAAA TGCTAATTTT
GCCGAGGTAA CAAAACCGCT ATGGGCATAT CTTGATGAAT TACATCAAAC GGCATGGCGT
AAAGGAAAGC AATTTCCATC AGGCAGCGCA CAGTCAATTC AACTGCTTGA TGATGGGCAG
ATAGATCTCG CGATCACATT CAATCTAAAT GAAGTCTTTT CAGCTCAAGC TAATGGTAAA
TTAGTCGAAA CAACAGAAGC TTATGCAATG GAAGCGGGGG CATTGTCTAA TATTCATTTC
CTAGCAATAC CATGGAATGC ATCCGCAAAA GAGGGAGCGC AAGTGGCGAT TAACTTTTTA
CTAAGCCCTA AAGCACAATC TCGTAAAGGT GATTTAAGTA TTTGGGGAGA TCCATCAGTA
TTAGAATCTC AGTATTTAAT GGGGTCAGCA AAAAATACGA CGTTATTTAA ATCATTAGCT
GAGCCACACC CAAGCTGGCA AGTGGCGTTA GAAAAAGAAT GGTTAGTACG TTACGGTAAT
TGA
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| Protein sequence | MKKWLLLLNS LIFSFGVNAT DTWKEVEQKA KGQTVYFHAW GGSQEINNYL RWADKELQRD
YGVTLKHVKV ADIAESTSRL IAEKTVGKNE GGSVDMVWIN GENFKSMKNS QLLFGPFVDR
LPSWKYVDKS LPIDSDFSEP TLGLEAPWGV GQLVFIHDKA TLNNPPQSFS ELLSYSKAFP
NRITYPKPPE FHGTSFLKAL LIELTNNNPQ LMKPVENANF AEVTKPLWAY LDELHQTAWR
KGKQFPSGSA QSIQLLDDGQ IDLAITFNLN EVFSAQANGK LVETTEAYAM EAGALSNIHF
LAIPWNASAK EGAQVAINFL LSPKAQSRKG DLSIWGDPSV LESQYLMGSA KNTTLFKSLA
EPHPSWQVAL EKEWLVRYGN
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