Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0341 |
Symbol | |
ID | 6961795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 383889 |
End bp | 384830 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643381640 |
Product | membrane protein |
Protein accession | YP_002264682 |
Protein GI | 209809144 |
COG category | [S] Function unknown |
COG ID | [COG2855] Predicted membrane protein |
TIGRFAM ID | [TIGR00698] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00265216 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTTTA CTAAACAACA TTTATTGCAA TACTTCCCTT TTTATATTCC TGCTCTTTTA GCACTAACAC CATGGGTAAA CTCCCCAACG GCTCTTGTCA TGGGATTTGC TTTAGCCAGC TTTGGCTTTG TCCCTACCAA TTTATCTTTA GGTAAAATCA CGAAAAAACT CTTAGCTTAT TCTATTGTAG GTTTAGGCTT TGGCATTCAA CTAAATGAAG CGATAGAAGC AACATCGAAT GGTATTGGAA TCATTCTATC TACGATTGTA GGTACGCTTA TTTTTGGTTG GTTCCTCGCT AAAAAAATGA AACTAGATAA AGTTACTGGG CATTTAATTG CATCAGGGAC AGCTATTTGT GGTGGCAGTG CCATAGCAGC TGTTGCTCCT GCAATTAATG CAGATGAAGA GTCGACAGGT TTAGCTTTAG CGACGGTATT TGTACTTAAC TCTATTGCTC TTTTTATTTT CCCCGTTATT GGGCATGCAT TAGAACTCAG TCAACATGCT TTTGGTACAT GGGCTGCAAT TGCTATTCAC GATACTTCAT CAGTTGTTGG TGCCGCTTCC GCTTATGGTG AAGAGGCTTT AAAAACAGCA ACAACCCTAA AACTTGCCCG AGCACTGTGG ATTGTCCCTG TGGCCTTAAT CAGTGCCCTA TTATTCAAAA ATACGAGTAA AAAAATAACG ATTCCTTATT TTATTTTATT TTATTGTTTA GCCATCTTAA TCAATGATAA CTTACCTCAA TTTCATGTCG TTTATGATGG TATTTTTAAC CTATCAAAAA AACTATTAGT ACTTTGTCTG TTTTTTATTG GGTGCAGTAT TTCAATTGAG AAGATCAAAT CTGCAGGTGC AAAGCCACTG ATCTTTGGAG TGACATTATG GGGGATCATC TCAACCACTT CATTATTTTG GATAATGAAT AACATCCCAT AG
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Protein sequence | MTFTKQHLLQ YFPFYIPALL ALTPWVNSPT ALVMGFALAS FGFVPTNLSL GKITKKLLAY SIVGLGFGIQ LNEAIEATSN GIGIILSTIV GTLIFGWFLA KKMKLDKVTG HLIASGTAIC GGSAIAAVAP AINADEESTG LALATVFVLN SIALFIFPVI GHALELSQHA FGTWAAIAIH DTSSVVGAAS AYGEEALKTA TTLKLARALW IVPVALISAL LFKNTSKKIT IPYFILFYCL AILINDNLPQ FHVVYDGIFN LSKKLLVLCL FFIGCSISIE KIKSAGAKPL IFGVTLWGII STTSLFWIMN NIP
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