Gene VSAL_II0341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0341 
Symbol 
ID6961795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand
Start bp383889 
End bp384830 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content37% 
IMG OID643381640 
Productmembrane protein 
Protein accessionYP_002264682 
Protein GI209809144 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00265216 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTTTA CTAAACAACA TTTATTGCAA TACTTCCCTT TTTATATTCC TGCTCTTTTA 
GCACTAACAC CATGGGTAAA CTCCCCAACG GCTCTTGTCA TGGGATTTGC TTTAGCCAGC
TTTGGCTTTG TCCCTACCAA TTTATCTTTA GGTAAAATCA CGAAAAAACT CTTAGCTTAT
TCTATTGTAG GTTTAGGCTT TGGCATTCAA CTAAATGAAG CGATAGAAGC AACATCGAAT
GGTATTGGAA TCATTCTATC TACGATTGTA GGTACGCTTA TTTTTGGTTG GTTCCTCGCT
AAAAAAATGA AACTAGATAA AGTTACTGGG CATTTAATTG CATCAGGGAC AGCTATTTGT
GGTGGCAGTG CCATAGCAGC TGTTGCTCCT GCAATTAATG CAGATGAAGA GTCGACAGGT
TTAGCTTTAG CGACGGTATT TGTACTTAAC TCTATTGCTC TTTTTATTTT CCCCGTTATT
GGGCATGCAT TAGAACTCAG TCAACATGCT TTTGGTACAT GGGCTGCAAT TGCTATTCAC
GATACTTCAT CAGTTGTTGG TGCCGCTTCC GCTTATGGTG AAGAGGCTTT AAAAACAGCA
ACAACCCTAA AACTTGCCCG AGCACTGTGG ATTGTCCCTG TGGCCTTAAT CAGTGCCCTA
TTATTCAAAA ATACGAGTAA AAAAATAACG ATTCCTTATT TTATTTTATT TTATTGTTTA
GCCATCTTAA TCAATGATAA CTTACCTCAA TTTCATGTCG TTTATGATGG TATTTTTAAC
CTATCAAAAA AACTATTAGT ACTTTGTCTG TTTTTTATTG GGTGCAGTAT TTCAATTGAG
AAGATCAAAT CTGCAGGTGC AAAGCCACTG ATCTTTGGAG TGACATTATG GGGGATCATC
TCAACCACTT CATTATTTTG GATAATGAAT AACATCCCAT AG
 
Protein sequence
MTFTKQHLLQ YFPFYIPALL ALTPWVNSPT ALVMGFALAS FGFVPTNLSL GKITKKLLAY 
SIVGLGFGIQ LNEAIEATSN GIGIILSTIV GTLIFGWFLA KKMKLDKVTG HLIASGTAIC
GGSAIAAVAP AINADEESTG LALATVFVLN SIALFIFPVI GHALELSQHA FGTWAAIAIH
DTSSVVGAAS AYGEEALKTA TTLKLARALW IVPVALISAL LFKNTSKKIT IPYFILFYCL
AILINDNLPQ FHVVYDGIFN LSKKLLVLCL FFIGCSISIE KIKSAGAKPL IFGVTLWGII
STTSLFWIMN NIP