| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0333 |
|---|
| Symbol | |
|---|
| ID | 6961788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011313 |
|---|
| Strand | + |
|---|
| Start bp | 376245 |
|---|
| End bp | 376559 |
|---|
| Gene Length | 315 bp |
|---|
| Protein Length | 104 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643381633 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_002264675 |
|---|
| Protein GI | 209809137 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00934106 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAG ATAAAAAGAG AACACCAGAG CAATGGCACG CTCTATTTGA ATCTCAGCAA
TCTAGCAAGC TTAGTGCCGC TGAATTTTGT CGTAACCATA ATATTCTGCC AAAGACATTT
AGTGCACGTA AAGCACGATG GAAACAAAAG ATTAACGCTT CTACTTTCTT GAAAGTAGAA
GCGTTAACAT CAACTATCAT CGCCACTCCA CAATTACCAG ATATTCAACT TTCTATCGGA
AAATTGCGAT TAACATTGCC AGCTAATACT GAACCTCACT GGATAGGACT CTTATTAAAA
GGGTATCAAT CATGA
|
|---|
| Protein sequence | MQKDKKRTPE QWHALFESQQ SSKLSAAEFC RNHNILPKTF SARKARWKQK INASTFLKVE
ALTSTIIATP QLPDIQLSIG KLRLTLPANT EPHWIGLLLK GYQS
|
|---|
| |