| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0312 |
|---|
| Symbol | |
|---|
| ID | 6961768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011313 |
|---|
| Strand | - |
|---|
| Start bp | 350282 |
|---|
| End bp | 350599 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643381613 |
|---|
| Product | hypothetical protein, putative anti-sigma factor antagonist |
|---|
| Protein accession | YP_002264655 |
|---|
| Protein GI | 209809117 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTAC ATCAATTTGA ATCTAACACC AATACCTTAG TGCTATCAGT TCAAGGGGAT
ATGGATGCAG TCGGTTGTCG AGATATTCAA CCAACCATCG ATGAAGTCAT TGAGCAAGAG
CACAGACAAG TACATATCGA CCTCGCTCAA GTGGCGTTTT TAGACTCTTC TGGTATCGGT
GCCATTGTGT ATTTATACAA ACGATTGGTC GAAAAAGAAC GCACAATGCA AATTCAAAAT
GCGCATGGCC AACCCTTAGA GTTACTTAAA TTGTTACGCA TTGAAAATGC AATTCCAGTA
AATAGCCCTA CACACTAA
|
|---|
| Protein sequence | MELHQFESNT NTLVLSVQGD MDAVGCRDIQ PTIDEVIEQE HRQVHIDLAQ VAFLDSSGIG
AIVYLYKRLV EKERTMQIQN AHGQPLELLK LLRIENAIPV NSPTH
|
|---|
| |