| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0136 |
|---|
| Symbol | |
|---|
| ID | 6961614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011313 |
|---|
| Strand | + |
|---|
| Start bp | 160057 |
|---|
| End bp | 160548 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643381456 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002264498 |
|---|
| Protein GI | 209808960 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1451] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAT TGCGATATTT AAAAGGGTAT CCTGAGCATA TTCTGGCACA GATTGAGCTG
ATGATAGATA ACGGGAAGTT AGCCGAGTGG GTAAAAAATA AATACCCAAC AATGCATGAC
ATTACCTCAG AGAAAGCCTT ATTTGAATAC ACTCAAGCTT TCAAAAACAA ATACATTAAG
AAATCATCAC CGTTAAGTAA GGTGGTGTAC GATCCTAAAA TACATATTGT CAATAATGCG
TTGGGTTTGC ATACGTTTGT TTCTCGTATT CACGGTAATA AGCTGAAAGC AAAAAATGAA
ATCCGCATAT CAAGTGTGTT TCGTAAGGCA CCTGAACCAT TGCTACGTAT GCTTGTGGTT
CATGAATTAG CGCACATCAA AGAGAAAGCC CACAACAAAG CCTTTTACGC GCTGTGTTGT
CATATGGAGC CTGAGTATCA TCAATTAGAG TTTGATGCGC GTTTGTATTT AACGTATTTA
GAAACGATAT AG
|
|---|
| Protein sequence | MTKLRYLKGY PEHILAQIEL MIDNGKLAEW VKNKYPTMHD ITSEKALFEY TQAFKNKYIK
KSSPLSKVVY DPKIHIVNNA LGLHTFVSRI HGNKLKAKNE IRISSVFRKA PEPLLRMLVV
HELAHIKEKA HNKAFYALCC HMEPEYHQLE FDARLYLTYL ETI
|
|---|
| |