Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0134 |
Symbol | |
ID | 6961612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 157455 |
End bp | 158930 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643381454 |
Product | N-acetylglucosamine-binding protein A |
Protein accession | YP_002264496 |
Protein GI | 209808958 |
COG category | [S] Function unknown |
COG ID | [COG3397] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.271889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGAATA AATGCTCAAC GAAAACACTA CTTGCACTGT CATTGATTGC TGCTAGTTCA GGTGTTGCTG CTCATGGTTA CGTATCAGAA ACAAATGATG GTATTGCGGG ATCTCGTGCT GCGCTATGTA AGTATCCGAC GTCTGATACT CAAGAAAAAA ACACAAACTG TGGTTCTGTT CAGTGGGAAC CACAAAGTGT TGAAGGCGAT GAGGGCTTCC CTGAATTCGG TCCTGCTGAT GGCCAAATTG CAAGTGCGGG TCTATCGCAG TTTTCAGAAT TAAATGAACA AACGTCTGAT CGTTGGGTAA AGCGACCTAT TACAGCTGGG AAACAAACGT TTGAATGGAC ATTTAGAGCA AACCACGTAA CAAAAACGTG GACGTATTAC ATGACAAAGC AGAACTGGAA TCAAAATGCC GTTTTAACGC GTGACTCTTT TGATCTGACG CCATTTTGTG AACTTGGCTA TAACATGAAC CAACCGCCAC TTGCTCCAGA AACCTTTTCT CATGAGTGTG TGGTTCCTGA GCGTGAAGGT TATCAAGTTA TCCTAGCGGT TTGGGATGTT GGTGATACAT CAAAAGCATT TTATAACGTG ATTGATGTGA AATTTAGTGG CGACGGTGGT GTGGTTGATC CAACTTGGAC TCAAGGTGGG CAAATTAACC CAACTCGTGA TTTAAACGTT GGTGATGAGG TTTACACACG TGTATTTGTT ACATCAGGTG AGAACTCTGC ATTATCAACA CGGTTGGTTA TTGATAACGC AACACAAGGT CAAGCAAATA ACTGGACTTA TGCGTTAGCA ACTAAGATCA ATAAAGAGCA AGAAAATATT GGTGCCGGTC AATTGAATGA TAAAGGTGAA TTCTCACCTA GCTTTGGTTC AAATCCAGTG TATTTGAAAT CAGGCAGCGG CTTAAATAAC GTAGAAATTG GTTACCAAAT TGAAGCGCCA GAACCAAGCT ATGAGCTAAA TGTTCAAGGC TTAGAACCTA TGTATACTAT CGGTGAAGAA GCAACAGAGT TAGATCTTAC GCTTGCGGCT ACTGGTGATA TGAATGTGGA ACTAACGGTA TATAACCACG CGAAAGAAGC GTTAGCGAAT ACGGTGGTTG ATATGAAAGA CGGAGATGTT GAGCCGATAG TTATGACGTT ATCTAAGTCA GAAAAAGGTC ATCATATGCT TGTTTCTATT ATCAAAAATA CAAAAGGTGA GTTAATCGAT CAAATTACGT CTGATTTCCA TCTGATGGAA GCGCAAACAC CACCTCCAGC GGGTGATTAT GAGTTTGTGT TCCCTGAAAA TGTAAAAAAC TACACAGCAG GTACTAAAGT ATTAGCTGAA GATGGTGCTA TCTACCAATG TAAACCATTC CCATATTCTG GCTACTGTGT TCAGTGGACA GAAACTGCGA CGAATTTTGC CCCAGGTGTT GGCTCTGATT GGGCAATGGC TTGGGATAAA ATCTAA
|
Protein sequence | MMNKCSTKTL LALSLIAASS GVAAHGYVSE TNDGIAGSRA ALCKYPTSDT QEKNTNCGSV QWEPQSVEGD EGFPEFGPAD GQIASAGLSQ FSELNEQTSD RWVKRPITAG KQTFEWTFRA NHVTKTWTYY MTKQNWNQNA VLTRDSFDLT PFCELGYNMN QPPLAPETFS HECVVPEREG YQVILAVWDV GDTSKAFYNV IDVKFSGDGG VVDPTWTQGG QINPTRDLNV GDEVYTRVFV TSGENSALST RLVIDNATQG QANNWTYALA TKINKEQENI GAGQLNDKGE FSPSFGSNPV YLKSGSGLNN VEIGYQIEAP EPSYELNVQG LEPMYTIGEE ATELDLTLAA TGDMNVELTV YNHAKEALAN TVVDMKDGDV EPIVMTLSKS EKGHHMLVSI IKNTKGELID QITSDFHLME AQTPPPAGDY EFVFPENVKN YTAGTKVLAE DGAIYQCKPF PYSGYCVQWT ETATNFAPGV GSDWAMAWDK I
|
| |