Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0110 |
Symbol | |
ID | 6961592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 135157 |
End bp | 137238 |
Gene Length | 2082 bp |
Protein Length | 693 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643381432 |
Product | TonB dependent receptor |
Protein accession | YP_002264474 |
Protein GI | 209808936 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTCTA AAAGTCAGTT GGCTCTTGTT ATTGGCGCCG TTTTATCTAT CCCTTTTGCT TACGCTGAAA CAGATGCATC AACTACTGAT GAGCACATGG TCGTTACTGG TCGTGATTAC GGTTATAAAG CAGACACAAA CTCAACGTCA ATGCGTATGG AAGCAACGCA ACTAGAAACT CCTGGGCAAG TAACGGTTAT TGATGAGCAA ATCATTGATG AGCAACGTGC GAGTACACTA GGTGAAGTGC TGAAGAATGA TTCAAGTATT TCTGAAGGCT CTAAATCAAC GAACCGTGAG CGTTTTTACT TGCGTGGTTT TAAATTAAGC AGCAGTTCAA GTTTCTTACG TGATGGTGTT CAACACTGGT CTCATTATCG TCAACCAATT GAGTTATTAG AACGTGTAGA AGTAATGAAA GGCCCTGCAG GTTTACTTTA CGGTAAGTCC ACGCCTGGTG GCTTAGTGAA CATGATTTCT AAAAAACCGA CTTATGAAAC ACAAGTAACC ATCAGTCAAG ATATCGGTTC AAATAATTAT ACTCGTTCAA TTGCTGACGT AAGTGGTTCA TTGAATGAGG ACCAAACATT ACGTGCTCGC GTGATTTTAT CTCAAGAAAA TCAAGATTCT TGGCGTACAC GTTTTGATGG CACTGCTGTT GAAACTGATC GTACTGTTGG TGGTCTTTTT GTTGATTATG ATATTAACGA AGACATCATG CTTTCTGCTC ATTACGATAG AACAAATGAA ATCGGTGATT TGGATAATGG TTCAAAGGTT GATACAACAA CCGGTGAAGT CATTGACCCA AATACGGTTA AAGACCAAAA CTGGGCGAAG ACAGACAATG ATGTGGCTAA TTACGGTGTA GGCTTAACTG CAAACTTGAC GGATTCATGG TCTGTTAAAA CGGGTATTAG CCGTCAGTAT TATGAGCGTC AGCGTACTGA ATCGGATATT AATAAAGATG GTAGTAGCTA CAAATCATCA GATCGTCATG ATGAATGGAC ATTTGATACT GCTTATGTTG ATTTCATGGG TGATGTTGAT GCCTTAGGCG TTAACCACCG TTTATTAGTG GGTGGTAATG GCCTGAATTA TGATTATAAG CGTCAATACG ATAGCTCTAA ATCATGCATA ACAAGCACTG ATACGTGCAG TGACGGTTTT AATCGCCCTA GTGATTTAAA TTCAAGTAAT GATACGGTTG GGCCCCACTC TAAGAGCCAA CATTACGGTA TTTACCTTCA AGATTTAGTG ACATTTAATG ACTCTTGGCA GTTACTTGCT GGCGCACGTT TTGCTGTAGA TAAAACAGAA GACAGCAAAG GAAAAAAAGA AGATTACACT AACATTCTTT CTAAGCTTGG TGTTATTTAT CATCCTGCTG AAAATGGTTC TATTTATGCC GTATATTCTG AAAGTTTTGA ACCAGTAGCA ACGATAAATG ATGCTGATGA TGTGAATGAT GGTCAAAAAC AAGATCCAAT GAAAGGAAAC TTATACGAGT TAGGATCTAA GTGGGAACTA TTAGATAACA GCTTGTATGT GTCTGGTGCT TTATTCCAAA TTGTACAGTC AAACATGCAA GTGTCTGAAG ATATTAACGG TGGTTCAAAT ACACGTACTT CACAGGTCGG TGAGCAAGTT CATACTGGTA TTGAATTAGC GGCGACGGGT TACCTGACAG AAGCGTTCTC ATTAAGCGCA TCAACGACAT TTCTTGATGC TAAATATGAA AATGATCCAG CGTTAGAAGG TAAAACACCT GCGGATGTAC CTGAATTTAG CGCAAGTATT TGGTCTCAGT ACGATTTCAA TAACGGCACA GGTATTAACC TTGGTGTTTA TCACGTAGGC GAGCGTTATG GTGATTCTAA AAACGAATTC AAAAAAGACG CTTATACACG AGTAGATATG GGTATCTCAC ATACCTTAAA GTACGACGAC AGTTTAGATT TTGTCGCTCG ATTTAATGTA GAAAACCTAT TAGATACTGA TTATTTAGCT GGTGGTAGTG CAAGTGATGT GGTTGTTGGT GAAGGCCGAA ACTACATGGC GACACTGCAA GTTAAATACT AA
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Protein sequence | MFSKSQLALV IGAVLSIPFA YAETDASTTD EHMVVTGRDY GYKADTNSTS MRMEATQLET PGQVTVIDEQ IIDEQRASTL GEVLKNDSSI SEGSKSTNRE RFYLRGFKLS SSSSFLRDGV QHWSHYRQPI ELLERVEVMK GPAGLLYGKS TPGGLVNMIS KKPTYETQVT ISQDIGSNNY TRSIADVSGS LNEDQTLRAR VILSQENQDS WRTRFDGTAV ETDRTVGGLF VDYDINEDIM LSAHYDRTNE IGDLDNGSKV DTTTGEVIDP NTVKDQNWAK TDNDVANYGV GLTANLTDSW SVKTGISRQY YERQRTESDI NKDGSSYKSS DRHDEWTFDT AYVDFMGDVD ALGVNHRLLV GGNGLNYDYK RQYDSSKSCI TSTDTCSDGF NRPSDLNSSN DTVGPHSKSQ HYGIYLQDLV TFNDSWQLLA GARFAVDKTE DSKGKKEDYT NILSKLGVIY HPAENGSIYA VYSESFEPVA TINDADDVND GQKQDPMKGN LYELGSKWEL LDNSLYVSGA LFQIVQSNMQ VSEDINGGSN TRTSQVGEQV HTGIELAATG YLTEAFSLSA STTFLDAKYE NDPALEGKTP ADVPEFSASI WSQYDFNNGT GINLGVYHVG ERYGDSKNEF KKDAYTRVDM GISHTLKYDD SLDFVARFNV ENLLDTDYLA GGSASDVVVG EGRNYMATLQ VKY
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