| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0077 |
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| Symbol | |
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| ID | 6961563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 102347 |
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| End bp | 103216 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643381404 |
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| Product | HTH-type transcriptional regulator, AraC-family |
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| Protein accession | YP_002264446 |
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| Protein GI | 209808908 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGAC AACACATATC CAGAATTAAT GATGTCTTGT TTTATATTCA TCAAGATATC
AGCCAAGAAC TTGCCGTAAA AGAGCTTGCG GATGTGGCTG CGTATTCAGA ACAGCATTTT
CATCGCATCT TTAAACAAGT GGTTGGGGAG TCTATTCATC AGTATATTCG TCGAACACGC
ATGGAATATG CAGCAAATCA GCTAATGTTT GATACCACTT CTACCGTACT TGATATTGCC
AATACGTGTG GTTTCAGTTC ACTGTCTTCA TTCAGTCGTG CATTTAAAGT CACGTTTGAT
ATGTCTCCGG GAGAATGGCG AAAACACGAT TTACAGATAT CAGATAAGCC GTATTTAAAA
GACCCAGAAA TTGCAGCAGG GTACTTGGCG GTTGCTGATC GAGATTTACC ACCGCCTAAA
ATTATTGAAG TCCCCGAGTT ATTAGCCGCC TATGTTCGAC ATGACGGTTA TAACCGCTCA
ATCAGAAACG CGTGGTTAAT ACTTAAAGCG TGGGCGAATT CAGAGAACCG AGACTTCTCG
ACACAATTTG GTTTGCATCA TTCAAACCCT GCGTGGGTCG ATTTAAATAA GTGTCGTTAT
GTTGCTTGTA TTGCGATAGA TAAACCGCTG AAATACCGAG GTGTTGTAAA CCAAATGGTG
ATCCCCGGTG GTTTGCATGC GGTGTTTCGT TTGCATGGCG TATATGGGCA ATTATTGCCA
CAGATCAGCA CGGTATTAGA GAAGTGGTTG CCAGCGTCAG GCTTTAAACT GAGATCGACA
CCGGCGTTTG TTCGTTATCA TCAAAATCAT TTTCTTAATG AAAACGAACA ATTTGAATTG
GATTTTCATC TGCCTATTAG CTTTTATTGA
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| Protein sequence | MSRQHISRIN DVLFYIHQDI SQELAVKELA DVAAYSEQHF HRIFKQVVGE SIHQYIRRTR
MEYAANQLMF DTTSTVLDIA NTCGFSSLSS FSRAFKVTFD MSPGEWRKHD LQISDKPYLK
DPEIAAGYLA VADRDLPPPK IIEVPELLAA YVRHDGYNRS IRNAWLILKA WANSENRDFS
TQFGLHHSNP AWVDLNKCRY VACIAIDKPL KYRGVVNQMV IPGGLHAVFR LHGVYGQLLP
QISTVLEKWL PASGFKLRST PAFVRYHQNH FLNENEQFEL DFHLPISFY
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