Gene VSAL_II0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0018 
Symbol 
ID6961511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand
Start bp19931 
End bp20536 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content37% 
IMG OID643381351 
Productouter membrane protein OmpA family 
Protein accessionYP_002264397 
Protein GI209808859 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TAATTTACCC AACCCTTATT ACGAGTCTTT TTTTGACGGC ATGTGTCTCT 
GGCGACAAGG ATTATATTGA AACACCCGCT CCCTCTCAGA TCGCAGACCT ACGAGATAAT
GATAACGATG GCGTTATTAA CGCTCGAGAT ATCTGCCCAG GAACACCAAG AGGCGCTCAA
ATTGATAATG ATGGTTGTGC CGAATACGTA GAGCAATCAG ATAAAAAAGA TTTAAAGATT
CTTTTTGCTA ACAATTCATC AGAAATATCA CCTATTTTCA AAAGTGAAAT AAGAACAATG
GCTGAATTTC TGGCTGAATA TCCAGAAACT TCAATTCAAC TTCAAGGTTT TGCAAGTCAA
CAAGGTAATG CAGAATACAA CATTCGCTTA TCTGAACTTA GAGCATCTGC AGTACGTGTT
GCTTTGATTA ATTATGGTGT TAATCCGGAC AAAATTGAAA CGATAGGTTT TGGTGATACC
TTATTAACAG CTAAAGGGGA TTCAGCAGTT AGTCACGCTT TAAATCGTCG AGTGGTTGCA
ACGGTTGTTG GTTTCAAAGG TGATGTAGTC GACGAATGGA ATATATTTAC ACGTAAAAAG
AAATAA
 
Protein sequence
MKKLIYPTLI TSLFLTACVS GDKDYIETPA PSQIADLRDN DNDGVINARD ICPGTPRGAQ 
IDNDGCAEYV EQSDKKDLKI LFANNSSEIS PIFKSEIRTM AEFLAEYPET SIQLQGFASQ
QGNAEYNIRL SELRASAVRV ALINYGVNPD KIETIGFGDT LLTAKGDSAV SHALNRRVVA
TVVGFKGDVV DEWNIFTRKK K