| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0010 |
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| Symbol | |
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| ID | 6961504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 10763 |
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| End bp | 12406 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643381344 |
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| Product | hypothetical protein |
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| Protein accession | YP_002264390 |
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| Protein GI | 209808852 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.736924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAGC ACTTTTTGGC ATTTTCAGAA AATGAATCTG TTGTACATTT TACTATTCCT
GAAAACACCA CGTTAACTCA ACCGATTGAA GCGGCAGATA TTCATCATGC TTTGCATACG
ATGGGGGCCA ATGAGTATTA TTTGTTTGAA AATAAATTAG AAGACATTCT ATCTGCATTC
AATAAAGGTG ATTTCACCGC CATAACAAAT ACATTAATTG CTCAACGTTT AGATGCACAA
CTCTCTATCC ACCTTCAAGA AGATGAAATG ATCGCTTCTA TGACCGTCAC TGGTGCGTAT
GGAGGTCACT CTGTACGTGG TCCCGCTATT GTTGCAGCCC TAACAGAAAA TTATATTTTA
AAAGGCATCA AAAAAGAAAA TCTTAAAACC TTATTATTAA AAAGCAAAGC GCTCACTCCT
GGAGAAACGT ATTCAGACAT CATTGCTGTA GGTCGAGAAG CCATACAGGG TGAAGACACT
GTCTTTATCG CCTCAGTTCC TAATATTCGC GAACGTATTT TGCAGCCACA AAAAACGACT
GATGGTCATG TGGATATGCG TAATTTAGGC GAAGTCATTA GTGTAAAGAA AAATACGCCC
TTAATGACAC GAATCCCCGC AACTCAAGGT GTCGATGGGA AAACAGTGAC AGGAAAACGG
ATCGCCGCAG TCCCAGGTAA TGAACACTTC TTTCATCTTT ATCCTGGCTC ATCAATTTCT
CTCGTTGATC CTAATTTACT TATTTCTGAT ATTGATGGTA CCCCATTAAT TCATGGTTCT
GGTGTTGCTA TCGATAATTT ACTAACACTA AAAACAGTCA ATGCGACCAC TGGACATGTG
TCATTTGAAG GCAGTATTTT TATTCAGGAA GACATTGAAT CAGGAATGAA AGTCACTGCA
ACAGGAGGGA TTACTGTTGG TGGCTTTATA GAAAATGCTG AAGTCATTGC AAAACACGAC
ATCACAGTAA TGAATGGCAT CATTGGCCGC CCAATGCCAG AAGGTGAAGC TCTAACTTGC
TTGGTAAATA CCGAAGGGTC AATAACGACT AAGTTAGCTC AAAATGCGCA TTTAATCGCA
CACGATGATA TTCACATTAC ATTGCATGCA AATCATTGCT TAGTCGAGTC TTTAGGCTCT
ATTTTTGTTA TTGATAAAGC AGAAAGAAAT GGCACAATCA GTGGCGGAAG TGCGACGGCA
AATGGCTCAA TCAAAACCGC AAATTTAGGG ATTGAAGGCG GGGCTTACAC TAAGGTTCAT
GCTTTTCATA ACTTCACGGA TCAAAAAGAA ACGCTTCATT CATTGCAAAA ACGTTTTGAT
GACGTAAGTG CTCAAATCAT CAAAATGTCA CAAATAAACA TTGCCCGTCA ATCTCCTGAG
CTCGCAGAAA AAATTCTGAG ATCCAAAGAG CAATCCAATC AAGATCTCCT TATTTTAAAA
TCTGAATTAG CAAAAGAGCA AATTACCTTT AATAAAGGGT TGAAAGAAAA TCATGTCTTT
GTAACGAATA AAATTTTTCC TCGTGTAGAC GTTCAATTCA ATACTGAACA TTTAGTAACG
AAGAGAGAAT ACAGTCCAAG CAAGATATCT TACTCTGGCT ACGACATCGA TATTGAGCCA
GTAATGATCA AGAAAAAATA TTAA
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| Protein sequence | MIEHFLAFSE NESVVHFTIP ENTTLTQPIE AADIHHALHT MGANEYYLFE NKLEDILSAF
NKGDFTAITN TLIAQRLDAQ LSIHLQEDEM IASMTVTGAY GGHSVRGPAI VAALTENYIL
KGIKKENLKT LLLKSKALTP GETYSDIIAV GREAIQGEDT VFIASVPNIR ERILQPQKTT
DGHVDMRNLG EVISVKKNTP LMTRIPATQG VDGKTVTGKR IAAVPGNEHF FHLYPGSSIS
LVDPNLLISD IDGTPLIHGS GVAIDNLLTL KTVNATTGHV SFEGSIFIQE DIESGMKVTA
TGGITVGGFI ENAEVIAKHD ITVMNGIIGR PMPEGEALTC LVNTEGSITT KLAQNAHLIA
HDDIHITLHA NHCLVESLGS IFVIDKAERN GTISGGSATA NGSIKTANLG IEGGAYTKVH
AFHNFTDQKE TLHSLQKRFD DVSAQIIKMS QINIARQSPE LAEKILRSKE QSNQDLLILK
SELAKEQITF NKGLKENHVF VTNKIFPRVD VQFNTEHLVT KREYSPSKIS YSGYDIDIEP
VMIKKKY
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