Gene VSAL_I3011 details

Gene Information

• Locus tag: VSAL_I3011
• Symbol: neuB
• ID: 6988893
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 3261537
• End bp: 3262577
• Gene Length: 1041 bp
• Protein Length: 346 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 643381289
• Product: putative sialic acid synthase NeuB
• Protein accession: YP_002264335
• Protein GI: 209696404
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2089] Sialic acid synthase
• TIGRFAM ID: [TIGR03569] N-acetylneuraminate synthase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.62069
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA TTTACATTGT TGCAGAAATC GGCTGTAACC ATAATGGTGA TTTTAATTTA 
GCAAAAAAAA TGGTTGATGA AGCGAAAAAA GCCGGTGTGG ATGCGGTAAA ATTCCAAACC 
TTTAAAGCAG ACCAACTAAT ATCTAAATTT GCACCTAAAG CGGAATACCA AATAAAAGTA 
ACAGGCAACG ATGAGTCTCA ATTAGAGATG ACGCGTAAAC TGGAACTACC TTATGATGAA 
TTCATTAAGC TAGAAGAATA CGCAAAAGAG ATCGGCCTTG ATGTATTCTC AACGCCATTT 
GATTTTGATT CGATCGATTT CTTGGCATCT CGTGAGCAAA AAACCTGGAA GATCCCATCG 
GGTGAGCTAT TAAATCTGCC TTATTTAGAA AAAATTGCCC GTTTGCCAAT TGCAGGCAAA 
GAGATTGTCA TTTCGACCGG TATGGCTACC GTGGAAGAGA TTCAGCTAGC ACTGGATGTG 
CTTGCTAAAA ATGGTATGAA GCCAGAAGAG ATCACTATCC TGCACTGTAA TACCGAATAC 
CCAACGGCAT TTGAAGATGT AAACTTAAAT TCCATTGCTG GTTTTAAAGA AACTTTTAAG 
CAATATAAAA TTGGTTTTTC GGATCACTCG CCAGGTTATT TTGCCAGTAT AGCATCAGTC 
CCATACGGTA TCACTTTTAT TGAAAAGCAT TTTACCTTAG ATAAGAATTT TCATGGGCCA 
GATCATAAAG CTTCGGTAAC GCCTGAAGAA TTAACATTGT TATGCCAAGG GATCCGTGCG 
GTTGAGCAAG CATTAGGTAG CCATGATAAA CTGGTGACAA ACTCAGAACG TAAAAATAAG 
ATTGTGGCGC GGAAATCGAT AGTGGCAAAG TTTGATATTA AGAAAGGTGA TGTGTTTACG 
CTTGATAACA TTACTACTAA AAGACCGGGT AATGGTATTA GCCCTATGTC TTGGTATGAG 
GTGTTAGGTA AAACGGCAGA ACAAGACTTC AGTGAAGATC AATTAATTGC ACATTCTGAA 
TTTGTAGCAC AAGAGGTATA A 

 

Protein sequence

MKKIYIVAEI GCNHNGDFNL AKKMVDEAKK AGVDAVKFQT FKADQLISKF APKAEYQIKV 
TGNDESQLEM TRKLELPYDE FIKLEEYAKE IGLDVFSTPF DFDSIDFLAS REQKTWKIPS 
GELLNLPYLE KIARLPIAGK EIVISTGMAT VEEIQLALDV LAKNGMKPEE ITILHCNTEY 
PTAFEDVNLN SIAGFKETFK QYKIGFSDHS PGYFASIASV PYGITFIEKH FTLDKNFHGP 
DHKASVTPEE LTLLCQGIRA VEQALGSHDK LVTNSERKNK IVARKSIVAK FDIKKGDVFT 
LDNITTKRPG NGISPMSWYE VLGKTAEQDF SEDQLIAHSE FVAQEV