| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I3001 |
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| Symbol | tatC |
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| ID | 6989274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 3250202 |
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| End bp | 3250957 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643381278 |
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| Product | sec-independent protein translocase protein TatC |
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| Protein accession | YP_002264326 |
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| Protein GI | 209696395 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.87318 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCATCAG TTGAACACTC TCAGCCGTTG CTCACTCATT TACTAGAGTT AAGAAACCGT
CTTTTAAAGG CATTAATTGC CGTTATCGTG GTGTTTTTAG GTTTAGTTTG GTTTGCTAAC
GACATTTATG AGTTCCTATC TGCCCCTTTG GTTGAAAGAT TACCAGCGGG TGCAACCATG
ATTGCAACTG ATGTCGCGTC ACCATTTTTC ACGCCTATAA AGCTGACTTT GGTGGCATCG
ATATTTGTCG CTATTCCGGT GATTCTTTAT CAAGTGTGGG CATTTGTAGC TCCTGGATTG
TATAAGCATG AAAAGAAATT GGTCATGCCT TTACTGTTTT CAAGCTCAAT GCTGTTTTAT
GCAGGTGTTT CTTTCGCCTA CTTTATTGTG TTTCCATTGG TGTTTAGTTT CTTTACGAAC
ATTGCACCGG AAGGCGTACA AGTAGCGACG GATATCTCCA GTTACCTTGA TTTTGTATTA
GCATTGTTTT TAGCGTTTGG TATTGCGTTT GAAATTCCTG TTGCCATCAT TTTATTATGT
TGGACGGGAG CGACAACGCC TGAAACGTTA AAACAAAAAC GTCCATATAT TGTCGTGGGT
GCTTTTGTTG TTGGTATGAT GCTAACACCG CCAGACATTA TCTCTCAAAC CTTACTTGCA
GTGCCTATGT GTATTTTGTT TGAGTTTGGT TTGTTCTTTT CTCGTTTCTA TGTGAGAGAG
AAAACAGATG ATGATTTGGA GCAAGATGAA GCGTAG
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| Protein sequence | MSSVEHSQPL LTHLLELRNR LLKALIAVIV VFLGLVWFAN DIYEFLSAPL VERLPAGATM
IATDVASPFF TPIKLTLVAS IFVAIPVILY QVWAFVAPGL YKHEKKLVMP LLFSSSMLFY
AGVSFAYFIV FPLVFSFFTN IAPEGVQVAT DISSYLDFVL ALFLAFGIAF EIPVAIILLC
WTGATTPETL KQKRPYIVVG AFVVGMMLTP PDIISQTLLA VPMCILFEFG LFFSRFYVRE
KTDDDLEQDE A
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