| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2998 |
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| Symbol | ubiB |
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| ID | 6988016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 3247883 |
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| End bp | 3249514 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643381275 |
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| Product | putative ubiquinone biosynthesis protein UbiB |
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| Protein accession | YP_002264323 |
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| Protein GI | 209696392 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0661] Predicted unusual protein kinase |
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| TIGRFAM ID | [TIGR01982] 2-polyprenylphenol 6-hydroxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCAT CAGAGCTAAA ACGCTTATAT CAAATCACCA AGGTTCAACT TGAGTATGGA
TTGGATGAGC TATTGCCTGA TCATGCATTA ACTCAATTAC CAAAACGTTT ACGCAAAGGG
TTATTTTGGA TTAAGAATCG CTATCCAGAA AAACCATTGG GTGAGCGTTT ACGGTTAGCA
TTGCAAGAAT TGGGTCCGGT TTGGATTAAA TTCGGTCAAA TGATGTCTAC GCGTCGTGAT
CTTTTTCCTC CTCATTTAGC TGATCAATTA GCTTTACTGC AAGACCAGGT CGCCCCCTTT
GATGGCCAGC TAGCAAAAGA TCAAATGGAG TTATCATTGG GTGGACCATT AGAAAATTGG
TTTACGGATT TTGATATTGT CCCATTAGCA TCCGCCTCGA TTGCTCAAGT ACACACCGCA
AAATTGAAAG AGTCTGGTCG TGAGATTGTC CTTAAGGTTA TTCGTCCGGA TATTCGCCCA
GTGATTGAAG CGGATATTCG CCTGATGTAT CGCATGGCTA CCTTGGTAGA GAAACACATA
CCAGAAGCGC GCCGCCTTAA ACCGGTCGAG GTCATCGAAG AATATGAGAA AACCTTAATC
GATGAGCTAG ACTTAAGAAG AGAGGCGAGC AATGCAATGC AATTGCGTCG CAACTTTGAA
GGCAGTGAAG AGCTGTATGT CCCTGAAGTT ATTTTGGATG TCAGTTCTGA ACACTTGATG
GTGTCTGAGC GTATTTATGG TATTCAAGTT TCTGACATCG AGCAACTAGA GAAAAATGGC
ACCAACATGA AGCTGTTGGC TGAACGTGGT GTGTCGGTTT TCTTTACTCA AGTATTTCGT
GACAGCTTTT TCCATGCGGA TATGCACCCG GGTAACGTAT TTGTAAATCC GGATAATCCA
GAGAATCCGC AGTGGATTGG ATTAGATTGT GGTATTGTTG GAACACTCAA TAAAGAAGAC
AAGCGCTATT TAGCGGAGAA CTTACTTGGC TTTTTTAATA GCGATTATCG TAAAGTCGCA
CAGTTACATA TTGATTCAGG TTGGGTTCCG GCAGAGACTA ATGTCGAAGA ATTCGAATTT
GCTATCCGTA TTGTCTGTGA GCCGATTTTT GCTAAACCAT TAGGTGAGAT ATCTTTTGGT
CATGTGTTAT TGAATTTATT TAACACAGCA CGTCGCTTTA ATATGGAAGT GCAGCCGCAA
TTAGTCTTAT TGCAAAAGAC GTTATTATAC GTGGAAGGAT TAGGCAGACA GCTATATCCT
CAATTGGATT TGTGGGCAAC CGCCAAACCG TTTCTAGAAA CGTGGATGGC AAAACAAATT
GGACCGGCAG CCTTTTTGAC TGCTTTGACT GAGAAAGCGC CATTTTGGGC TGAGAAACTG
CCAGAACTAC CTGATTTAGT TTATGACAGT TTGCGCCAAG GCAAAGTTCT TAATCAACGA
ATGGATAAAC TTTACGCAGG TTATCGTCAA AGTAAGCGTC AACAGGCAAA AGGACAATTC
CTATTTAATG TTGGAGCAAC TCTGCTGATT TGTTCTGCGG TGTTATTAAC CAGTAACATT
ACTGCGTTAG CATCAATTAG TGCTGCTACA GGTGTCACGT TTTGGCTATT AAGCTGGCGA
GCATATCGTT AA
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| Protein sequence | MTPSELKRLY QITKVQLEYG LDELLPDHAL TQLPKRLRKG LFWIKNRYPE KPLGERLRLA
LQELGPVWIK FGQMMSTRRD LFPPHLADQL ALLQDQVAPF DGQLAKDQME LSLGGPLENW
FTDFDIVPLA SASIAQVHTA KLKESGREIV LKVIRPDIRP VIEADIRLMY RMATLVEKHI
PEARRLKPVE VIEEYEKTLI DELDLRREAS NAMQLRRNFE GSEELYVPEV ILDVSSEHLM
VSERIYGIQV SDIEQLEKNG TNMKLLAERG VSVFFTQVFR DSFFHADMHP GNVFVNPDNP
ENPQWIGLDC GIVGTLNKED KRYLAENLLG FFNSDYRKVA QLHIDSGWVP AETNVEEFEF
AIRIVCEPIF AKPLGEISFG HVLLNLFNTA RRFNMEVQPQ LVLLQKTLLY VEGLGRQLYP
QLDLWATAKP FLETWMAKQI GPAAFLTALT EKAPFWAEKL PELPDLVYDS LRQGKVLNQR
MDKLYAGYRQ SKRQQAKGQF LFNVGATLLI CSAVLLTSNI TALASISAAT GVTFWLLSWR
AYR
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