| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2992 |
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| Symbol | |
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| ID | 6988012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 3242186 |
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| End bp | 3243391 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643381269 |
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| Product | MFS transporter |
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| Protein accession | YP_002264317 |
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| Protein GI | 209696386 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACACGC CAAGCTCAAG ACCATCAGAT AAAAAATTGA TCACCCTTAT GGTGATGCTC
GTTTTATTCA GTCCGTTAGC GATTGATATT TATCTGCCTG CATTACCGAT GATGGTAAGC
GAATTCCAAG TTGCATCAAC ATTAGGACAA GACACGATAA CGTGGTTCAT GTTCAGTATG
GGATTAGGCC AATTGTTTGC TGGTCCATTA GCGGATCGTT ATGGCCGTCG TCCTATCGCT
CTTACTGGTA TTGTTATTTA TGGTTTGAGT GCGGCATTAG CGTATTCAGC TCAAGAAATG
GAAATGCTGT TGTTGGCTCG TTTACTTCAA GGTTTTGGTG CCTGTGCGAC TTCTGTTGCG
GCGTTCGCAT CAGTACGAGA CTCATTTGGT GCAGAGAAGA GTGGTCGAAT GATCAGTTAT
TTGAATGGCG CGATTTGTTT TATTCCTGCG TTAGCACCAA TTTTAGGCAG TTATTTAACG
ATGCATTTTG GTTGGCGTTC AAACTTCAGT TTCATGGCAG GGTTTGCATT AGTTAGTTTT
GTGATTATCG CGTTGAACTA TAAAGAAACA AAACCATCAA ATACCTTACA AACAGGGCGA
TTGATCAGTC CATCTCGTTA TTGGTCAGTG CTAAAGCATC CCGCCTTTTT GTTCCATGCG
ACATTATGTA TGTTAGCGAT GGGCGTCATT TTAGCGTATG TGACATCGGC ACCGGTATTA
CTGATGGATA AACTTGGGCT TACAATGCAA GAGTTTACCA ATTGGTTTGC GGTGAATGCG
GTACTAAATA TCATGGCATG TTTTGCTGCA CCAAAATTCA TGATCAAATT CGGAACTCGT
AATGCATTAC TTTTCGGCCT CAGTATTTTA GTGGTTGCCG GTGGGTTAAT GTTAGGGTTC
CAACATATTC AGCAAGCTTG GGCGTTTATG ATCCCGATTT TCTTCTCGTC AGTAGGCTTC
GCATGGGTAC TGGGTTCGGC GGCAGGTAAG GCACTAGCAC CATTCGGTGA TAGAGCAGGA
ACTGCGGCAG CATTATTAGG GCTGTTTCAA ATGAGTGGTG CGGGAATCAT TGTTGGCACA
ATGCAAAGAT TAGCACTCCC TTCAGCACAA CTCTTAGCAC TAATGATGTG GCTTCTCATC
CCAGGCTTGC TGATCCTATT AAGTCGCGTT GGTAAACGAT GGCATTCAGA TCCAATTACT
GAATAA
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| Protein sequence | MHTPSSRPSD KKLITLMVML VLFSPLAIDI YLPALPMMVS EFQVASTLGQ DTITWFMFSM
GLGQLFAGPL ADRYGRRPIA LTGIVIYGLS AALAYSAQEM EMLLLARLLQ GFGACATSVA
AFASVRDSFG AEKSGRMISY LNGAICFIPA LAPILGSYLT MHFGWRSNFS FMAGFALVSF
VIIALNYKET KPSNTLQTGR LISPSRYWSV LKHPAFLFHA TLCMLAMGVI LAYVTSAPVL
LMDKLGLTMQ EFTNWFAVNA VLNIMACFAA PKFMIKFGTR NALLFGLSIL VVAGGLMLGF
QHIQQAWAFM IPIFFSSVGF AWVLGSAAGK ALAPFGDRAG TAAALLGLFQ MSGAGIIVGT
MQRLALPSAQ LLALMMWLLI PGLLILLSRV GKRWHSDPIT E
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