| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2989 |
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| Symbol | |
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| ID | 6989285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 3236553 |
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| End bp | 3238976 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643381266 |
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| Product | putative beta-N-acetylhexosaminidase |
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| Protein accession | YP_002264314 |
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| Protein GI | 209696383 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CGCTTTTAGC TCTTACCGTG TCGAGTATTA TCTTAAGTAC CCCCTCACTC
GCGTCTGCAC CAAATACAAA TTTAAATTTG ATGCCATACC CTCAATCTGT AGAGTTAAAA
TCAGGAAAAC TGCCCATTGA TAACAATTTC AGTATTTATA TTGATGGTTA TAAATCGGAA
CGCATTCAAC AATTGGCTCA ACGAATCATT AAACGCATCG AAGCACAAAC CGGCTTACCT
CTTCTTTCCC CATTTTCTAA TTCAGAGAAA AACGCCACTT TAATTATTCG AGTCAATAAA
GCCGCAAAAA AAGAGATTCA AGACAATCAT ATTGATGAGT CTTACCAGCT GTCCGTAAAC
CAAAAGCAAA TCATCTTACA AGCTGAACGC CCTTATGGCG TAATTAGAGG TGCAGAAACT
TTCCTTCAGC TTATCACAAC ATCAAAGAAT GGTTACTCTG TTCCTCAGAT AATAATTGAA
GACCAACCTC GTTTTCCATG GCGTGGCGCT TCATTCGATT CCTCACGTCA CTTTGTTTCA
ATCGAAACGA TTAAACGTCA GATAGATGGT TTCGCGTCTG CCAAAATGAA TGTGTTTCAC
TGGCATCTTT GGGATGACCA AGCCATTCGC ATTCAAATTG AAAGCTACCC TAAATTATGG
CAAAAAACCG CTGACGGTGA TGTTTACACC AAAGAAGAGA TTAAAGACGT TATTGAGTAC
GCACGGTTAC GCGGCATTCG AGTGATCCCT GAAATATCAT TACCGGGTCA TGCCTCTGGG
GTAGCTCACG CCTACCCAGA ACTAATGTCG GGTGAAGGTA AACAATCTTA TGAGCAACAA
CGAGCTTGGG GAGTATTTGT CCCTTTAATG AACCCTCTCA ACCCTGAGTT ATATATCTTC
TTCGACAACG TATTCAGTGA AGTTACCGAC CTCTTCCCTG ATGAATATAT TCACATTGGT
GGTGACGAAC CAAATTATCA GCAATGGAGT AACAATAAAA AAATCCAAGC TTTCATCAAA
GAAAATAACA TTGATGGTAA TCGAGGTCTT CAATCTTACC TAAACGCACG CATTGAAAAA
ATGTTGAATG ACAAAGGTAA GAAGATCATG GGTTGGGATG AGATTTGGCA CAAGGACCTA
CCAACTTCTA TCGTGATTCA AAGTTGGCGT GGGCACGACA GTATTGGACA AGCTGCAAAA
GAAGGTTACG CAGGATTATT ATCAACGGGA TTTTACTTAG ATCAACCTCA ACCGACTAGC
TACCATTACC GCAACGATCC AATGCCAAAA GGACCACAAG TCGATGACCA ACAGCATCAA
GGTGAAAGCT TTGAAACCTA CACATGGCAA AAACCAAGAG GCAAAGGTGG CCCTCGTAAA
GGGACATTAA CGATCATTAC CAGTAAAGAG GGTAACGCAC GTGCCTTTAC CGATTACAAC
GGAAAGTCAC GCGCAAAAGT TGATATTATC GAGTACACCA AAGGAGAATC ATTCCGTGGT
CACTTTGATA ATTTCATGTC TTATACTGAA TTCAACTTAA CGATGGATAA CCGCCAATTT
TCTGATGGCA GTTACCAATT GATTGGTAAT GTTCGTTGGC CAACAACAGG AGAGTTAACG
GCCTCCTCGT CAATGAAAGG AACCAAGATT GAAAAACCTA CCGGTGGTTA CCCCGTCGCA
TTAAATGAAA AAGAGCAAGT ATTAATCCTT GGTGGAGAAG CCGCTATCTG GGCTGAGAAC
TACGATGACC TCACCGTTGA AGCTCGTATT TGGCCTCGCA CTTACGCGGT TGGTGAACGC
TTATGGTCAG CTGAATCTCT GACAGATGAA GACAGTATGT ATAAACGGTT AGAAGTCATG
AATAACTGGG CGACAATTTC TGTTGGTTTG CAGCACCAAG CAAACAGTTA TAAACAGTAC
TTACGTTTGG CTAGTTTTGC AAACTATGCT GAACCAGCAC AATATTACGC ACGTAACTGG
GCTAAATTTA ATGCCACCGA TCCTAAAGGC GAATTATACA ATCAATATGA AAGGTTAAAT
CGTTTTGTTG ATGCCGTACC TGTTGAAAGT TTGGCCGTAT TAAAAATGAT GAGTTTGGCA
ACAACGGCGA CAAATACCCC CTCTGATTTA CAAGAATTGA AACGCCACTA TCAAACGGTG
TTAGACAGTG CCATAAAATC AAAACCTATT TTTGAAAACA ACATTGCTTC TATCGATACT
GCACCATTAG CCGAAAAGCA TAAAGAGGTG GCAACCGCCG CTCTAGAGCT TATTGCAATC
CTAGAAAAAG GAAATAAACC AACATCAACA CAGCTTCGTC ACGTTATCTC CGTAACCACA
ACGGCATCAG GAATGTACGA TGAAATGATC GTTGCAATCG TTCGTCCAAC AGAAGAACTA
GTGCGTCAGC TACGTAAACA ATAA
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| Protein sequence | MKKTLLALTV SSIILSTPSL ASAPNTNLNL MPYPQSVELK SGKLPIDNNF SIYIDGYKSE
RIQQLAQRII KRIEAQTGLP LLSPFSNSEK NATLIIRVNK AAKKEIQDNH IDESYQLSVN
QKQIILQAER PYGVIRGAET FLQLITTSKN GYSVPQIIIE DQPRFPWRGA SFDSSRHFVS
IETIKRQIDG FASAKMNVFH WHLWDDQAIR IQIESYPKLW QKTADGDVYT KEEIKDVIEY
ARLRGIRVIP EISLPGHASG VAHAYPELMS GEGKQSYEQQ RAWGVFVPLM NPLNPELYIF
FDNVFSEVTD LFPDEYIHIG GDEPNYQQWS NNKKIQAFIK ENNIDGNRGL QSYLNARIEK
MLNDKGKKIM GWDEIWHKDL PTSIVIQSWR GHDSIGQAAK EGYAGLLSTG FYLDQPQPTS
YHYRNDPMPK GPQVDDQQHQ GESFETYTWQ KPRGKGGPRK GTLTIITSKE GNARAFTDYN
GKSRAKVDII EYTKGESFRG HFDNFMSYTE FNLTMDNRQF SDGSYQLIGN VRWPTTGELT
ASSSMKGTKI EKPTGGYPVA LNEKEQVLIL GGEAAIWAEN YDDLTVEARI WPRTYAVGER
LWSAESLTDE DSMYKRLEVM NNWATISVGL QHQANSYKQY LRLASFANYA EPAQYYARNW
AKFNATDPKG ELYNQYERLN RFVDAVPVES LAVLKMMSLA TTATNTPSDL QELKRHYQTV
LDSAIKSKPI FENNIASIDT APLAEKHKEV ATAALELIAI LEKGNKPTST QLRHVISVTT
TASGMYDEMI VAIVRPTEEL VRQLRKQ
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