| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2973 |
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| Symbol | fadA |
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| ID | 6988003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 3219285 |
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| End bp | 3220448 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643381248 |
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| Product | 3-ketoacyl-CoA thiolase |
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| Protein accession | YP_002264298 |
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| Protein GI | 209696367 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02445] fatty oxidation complex, beta subunit FadA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAATG TCGTTATTGT TGATTGCATT CGAACACCGA TGGGACGCTC TAAAAATGGG
GTATTTCGTC ATACTCGTGC CGAAGATTTA TCCGCGCACC TCATGAAAGG GTTATTAGAA
AGAAACCCAA ACGTTGACCC AAACCAAATT GAAGATATCT ATTGGGGTTG TGTGCAGCAA
ACCTTAGAAC AAGGCTTTAA TATTGCTCGT AATGCATCGT TATTAGCAGG ATTACCCAAA
TCCATTGCCG CAACAACAGT TAACCGCTTA TGTGGTTCAT CGATGCAGGC TCTACATGAT
GCCTCTCGTG CCATTATGGT TGGAGATGCC GACATCTGCA TTATTGGTGG TGTCGAGCAC
ATGGGTCACG TACCAATGAA CCATGGTGTT GATTTCCACT CTGGCTTATC AAAAAACGTA
GCTAAGGCTT CGGGTATGAT GGGGTTAACG GCTGAAATGC TCGGTAAGAT GCATGGTATC
TCTCGTGAAC AACAAGATGC CTTTGCTTTT GCTTCTCATC AAAAAGCACA TAGAGCGACG
ATTGAAGGGC ACTTCGATTC TGAGATTCTT CCGATGGAAG GTCACGATGA GAATGGGGCG
CTAACGCTAG TGAAACACGA TGAAGTCATT CGTCCAGAAA CAACCCTTGA AGGTTTGGCT
GCTCTGAGAC CGGCTTTTGA TCCCGCTAAC GGTACCGTTA CCGCAGGTAG TTCATCTGCA
TTATCGGATG GTGCTTCCGC CATGCTGATC ATGAGCGAAG AAAAAGCAAA TGAACTAGGA
TTAACCATTC GAGCGAAAAT TCGTTCAATG GCGGTCTCTG GCTGCGATCC TGCCATTATG
GGTTATGGAC CTGTTCCTGC AACCAAAAAA GCATTAAAAC GTGCCGGCCT ATCCATTGAT
GATATTGACC TGTTTGAGCT GAACGAAGCT TTTGCCGCTC AATCACTGCC TTGCATTAAA
GACTTAGGTT TATTTGATGT GATGGAAGAA AAGATAAACT TAAATGGAGG GGCAATTGCG
TTAGGTCATC CATTGGGTTG CTCAGGTTCT CGTATTGCCA CCACATTAAT TAATAATATG
GAGCGTACAG GTGCAAAACT GGGCGTAGCC ACCATGTGTA TTGGTTTAGG GCAAGGTATT
GCAACGGTCT TTGAACGACC TTAG
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| Protein sequence | MKNVVIVDCI RTPMGRSKNG VFRHTRAEDL SAHLMKGLLE RNPNVDPNQI EDIYWGCVQQ
TLEQGFNIAR NASLLAGLPK SIAATTVNRL CGSSMQALHD ASRAIMVGDA DICIIGGVEH
MGHVPMNHGV DFHSGLSKNV AKASGMMGLT AEMLGKMHGI SREQQDAFAF ASHQKAHRAT
IEGHFDSEIL PMEGHDENGA LTLVKHDEVI RPETTLEGLA ALRPAFDPAN GTVTAGSSSA
LSDGASAMLI MSEEKANELG LTIRAKIRSM AVSGCDPAIM GYGPVPATKK ALKRAGLSID
DIDLFELNEA FAAQSLPCIK DLGLFDVMEE KINLNGGAIA LGHPLGCSGS RIATTLINNM
ERTGAKLGVA TMCIGLGQGI ATVFERP
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