| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2971 |
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| Symbol | |
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| ID | 6988001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 3216466 |
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| End bp | 3217407 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643381246 |
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| Product | HTH-type transcriptional regulator, LysR family |
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| Protein accession | YP_002264296 |
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| Protein GI | 209696365 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.554453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTAG AAGAAGTTTA TCGTCGTGAT TTAAATTTAT TGGTTGCGTT AAAAGTTCTG
TTAGAAGAAA ACAGCGTTAG CCAAGCGGCG ATTCGCCTGA ATTTAAGTCA ATCAGCGATG
AGTCGGGTGC TGGGTCGGCT GCGTGATTTA CTGGGCGATC CTTTATTTAC TCGACAAGGG
CAGCATCTGG TTCCAACAGA AAAAGCATTA GAAATTTGTG CGCAAATAAA CCAACCTTTA
GAGTCGTTAC GTCAGTTGCT TACGCCCAGC GATTTTACCC CTATGCATTG TGATCAACAT
TTTTTGATCG CAACGACCGA TTATGCAATG CAGACAATTC TACCTTATGC ATTACCTAAG
ATTTACGAAC AAGCCCCAAA TATATCTTTA GAGTTTACGT CTCTTAATCA TGAAAACTTG
TTTAAACAAT TGAGTACAGA GAAAGTCGAC ATGGCAATTT GTCGTCCTAT CGGGTCCGTA
TCTCCATTAA AACAAGAAGT ATTAGGGCAG GTTGGAGTGT TATGTCTTTT ATCAAAGCAT
CATCCGTTGT CTCATGCATT ACTGACATTG GACGATTATT TATCGTATCC ACATGCGATG
ATTGCGATCA GTGATGGTGT AAAAGCATTG TTAGATACCG CGTTGATTGG CCAACGAGAT
CGCAAACAAG TATTAAGGGC TTATCATTTA GAAGCGGCTT TAGCGATTGT CGACCGGATG
CCATTAATTA TTACGGTTCC AGCCGATTTA GCTTATTTAG TTGCTGAACG TTATGACTTA
GTGATTAAAC CATTACCTTT TGAATTTACA CCGTTTGATT ATTCATTAAT TTGGCATTCT
CGTTGTGATA CATCGCCCGC GCAAAGTTGG TTACGTAGAG TTGTAAAAGA AGAGTGTGGG
AAGTTAATTG AAAAACGCAT TGAAGATATT GGCTTTGTTT GA
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| Protein sequence | MELEEVYRRD LNLLVALKVL LEENSVSQAA IRLNLSQSAM SRVLGRLRDL LGDPLFTRQG
QHLVPTEKAL EICAQINQPL ESLRQLLTPS DFTPMHCDQH FLIATTDYAM QTILPYALPK
IYEQAPNISL EFTSLNHENL FKQLSTEKVD MAICRPIGSV SPLKQEVLGQ VGVLCLLSKH
HPLSHALLTL DDYLSYPHAM IAISDGVKAL LDTALIGQRD RKQVLRAYHL EAALAIVDRM
PLIITVPADL AYLVAERYDL VIKPLPFEFT PFDYSLIWHS RCDTSPAQSW LRRVVKEECG
KLIEKRIEDI GFV
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