Gene VSAL_I2956 details

Gene Information

• Locus tag: VSAL_I2956
• Symbol: eda
• ID: 6987992
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 3201855
• End bp: 3202490
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 643381233
• Product: KHG/KDPG aldolase
• Protein accession: YP_002264283
• Protein GI: 209696352
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase
• TIGRFAM ID: [TIGR01182] Entner-Doudoroff aldolase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTGGA ATCTTTCGCC TTCAGACGTA TTTAGCGCAT CACCCGTTGT TCCTGTTATG 
GTTATTGAAC AACTAGAAGA TGCGGTACCA ATGGCTCAAG CTTTAGCGGC GGGCGGTATT 
AATGTATTTG AAGTTACATT GAGAACGGCG GTTGCTCTTG AGGCGATTAC GGCGATTCGA 
AAAGCAATGC CACAAGCCCT TGTTGGTGCC GGTACAGTGA TCAGCACTCA ACAATATGAT 
CAAGCGGTAG AGGCTGGCGC TAAGTTTATT ATCTCTCCTG GATTTACTCC CAGTTTATTA 
GCTCATGCAA AATCGGCAGA TGTTCCTTTG ATCCCTGGTG TTGCTACGCC GTCAGAAGTC 
ATTCGTGCCA TTGAGTTAGG TTATACGCAC CTTAAATTCT TTCCAGCAAG TGCGTTTGGT 
GGACCATCTG TATTGAAAGC GATGGCGGCT CCATTACCTC AAGTGCAGTT TTGTCCTACT 
GGTGGGATTA ATCCACAGAA TGTAAATGAC TACACTGCGT TAGAGTGTGT GGCGACGGTC 
GGTGGCTCTT GGATGCTACC AAAAGACGTC ATTGCCGCTA AAGACTGGTC AAAAATAACC 
ACGCTTGCAA AAGAAGCGAT TGAGCTAATT AAATAA 

 

Protein sequence

MSWNLSPSDV FSASPVVPVM VIEQLEDAVP MAQALAAGGI NVFEVTLRTA VALEAITAIR 
KAMPQALVGA GTVISTQQYD QAVEAGAKFI ISPGFTPSLL AHAKSADVPL IPGVATPSEV 
IRAIELGYTH LKFFPASAFG GPSVLKAMAA PLPQVQFCPT GGINPQNVND YTALECVATV 
GGSWMLPKDV IAAKDWSKIT TLAKEAIELI K