Gene VSAL_I2929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2929 
Symbol 
ID6988949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp3173232 
End bp3175214 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content38% 
IMG OID643381208 
Producthypothetical protein 
Protein accessionYP_002264258 
Protein GI209696327 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACACCA CGTTGAAAAG CCTCGGTTGG CTGCTCACTC TTTGTTTATT ACTTGTGGCG 
GCATTCTTAT CTCTTTTACA TACGCCTTAC GCACAGCCAT TATTGAATCC AGTCGTTGAA
AAGTTGACTC ATCAAACGCT CTCCTTTGGT GGGATCTCCT ATTCTATTCA CGATCCTTCG
CACCTCACCA TCTCTGATGT CGTGATTCAT TCTGAGCCAG AGCTACCCAT TCAACAAATT
GATTTATGGC TTTCTAAGCA TCCAATTCAA AATAATAAAC TCGCTTTTGA TAGTGTGAAA
ATTGATGGAA TTAGCCTACA AAACGGACTG CCTAATACTA AAAAACTCAA TTGGTTTTCA
ATCTCTCAAC TCAGTATTTC TAATTTAGAT TTTGCAGATG ATGGATTGGT CGTACGTGAA
GCACAAATCC AATTAAGTAA CTATGATGTG CATAATGAAA AAGGACTGCC TTTTGAAGGG
GGGTTTCAAT TATCTACTCA ACAACTTTAC TGGCAAGGTG AAGCCCTAGA TGACGTCTTA
ATAGATGGTT ATTACACTGA AAACTATACG GCATTACAGG GTATTTCATT AACTTGGCGC
AATAGCACCA TTACAGCTCA AGCCGAATTA AAAGAAAATA AGTTATGGGT TATTCCTCAA
TTTACACTGC GTAAATTTAA TTTAGAATCG GATAATGCCG ACATTATTGG AAAGCCTCTG
CAATGGCTTT CAGAACAAGG TTTCACGTAT CAATTCGAAC GAATCGATCT ACTCGATGTG
AATATTGAAT TACCTCAATT CTCTGTCAAT GATCTCAGTC TTTCTGCTGA AAACATTCTT
CTTCCTTATA AGATTTGGCA GCAAAATAAC GCGAATATTT CCTTTAGTGC CGATAGCTTG
GTATGGAAAG ACACCATTAT TAATAAGCCG ATAATAGAGT TAACGCTAAC AAATAAAAAA
GCGACTATTT CTAATCTTTC ACTGGATGTT TTTAATGGCA ACATTCAACT TTCAGGACTG
CTTTCGCCTA CCACGATCAA TTTATCGTCT CTCACTTTAA ACCAAATAAA ATGGTTAATC
AGTCCTCAAG AACTCGATTC AATCAGCAAC TATCTCACTC AATTAGAACA AGTGAACATC
GCCAACTTAG ACATTAATAA TTCTCAGATT ATTCAACTTG AAACGGCCCA CCCATTCCAG
TTGTCTGGTT TAAACGTAGA AGGTCATGAT CTGGATTTAC TTCGTTATTA TCAATGGGCT
TTATGGGACG GAAAATTATC AATAAGTGCT TCAAATGCCA GCTTAAATTA TTTGCTCACT
CAACAACTAT TGATCGAAAC AAACACGAAT AATGGACGGT GGACAATAGA GCGCGCTCTA
TTCCCATTAA CAGAAGGGTT AATTGGACTA AATGGCAGTA TTAACCTCAA ACAAGACAGT
CAGCCATGGC AACTTGAGGC TTATGGTGAT GGTATCCCTC TCTCGGATTT AGCGAAATGG
CTTCCCAACC CAATTCCTTT AGAAGGAATG GCTGAATTTA CTTTTTCAGG TAATGGATTA
GCGGTAAATA AAGACAGTTT TAATTACAGC TTTGATGGCG ATTTAAACGT TATTCCAAGA
GAAACAACAA CAACAGAAAC GGCCAAAGAT TTGTGGCAAC TAAAACTTGG GCTCATTCCA
GAAGAAAGCC AATCAGAAAA AGACGTTAGT GCTCAAACAC AACGCAAGAA AGAACATACA
ATGGATAAAA AAACCATCTA CCCAATCAAT ATTGAGCCAA TTCATATTTC GGCAAACAGG
GGCCGAATTT CAATTAATCC AATAATGATT ACCGGTGACG GATTTAATTA TAATGTGGAA
GGGGAGTATG ATTTAGTGAA CCCAGAAAAG GCAGAAACGG TCATCTCATT AACACAAGAA
TGCCATCAAA TAGTACAGCG ACTCTTTTCT GATAAAGTCG ATTTAATCAA TTATTGTCAG
TGA
 
Protein sequence
MYTTLKSLGW LLTLCLLLVA AFLSLLHTPY AQPLLNPVVE KLTHQTLSFG GISYSIHDPS 
HLTISDVVIH SEPELPIQQI DLWLSKHPIQ NNKLAFDSVK IDGISLQNGL PNTKKLNWFS
ISQLSISNLD FADDGLVVRE AQIQLSNYDV HNEKGLPFEG GFQLSTQQLY WQGEALDDVL
IDGYYTENYT ALQGISLTWR NSTITAQAEL KENKLWVIPQ FTLRKFNLES DNADIIGKPL
QWLSEQGFTY QFERIDLLDV NIELPQFSVN DLSLSAENIL LPYKIWQQNN ANISFSADSL
VWKDTIINKP IIELTLTNKK ATISNLSLDV FNGNIQLSGL LSPTTINLSS LTLNQIKWLI
SPQELDSISN YLTQLEQVNI ANLDINNSQI IQLETAHPFQ LSGLNVEGHD LDLLRYYQWA
LWDGKLSISA SNASLNYLLT QQLLIETNTN NGRWTIERAL FPLTEGLIGL NGSINLKQDS
QPWQLEAYGD GIPLSDLAKW LPNPIPLEGM AEFTFSGNGL AVNKDSFNYS FDGDLNVIPR
ETTTTETAKD LWQLKLGLIP EESQSEKDVS AQTQRKKEHT MDKKTIYPIN IEPIHISANR
GRISINPIMI TGDGFNYNVE GEYDLVNPEK AETVISLTQE CHQIVQRLFS DKVDLINYCQ