Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2929 |
Symbol | |
ID | 6988949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 3173232 |
End bp | 3175214 |
Gene Length | 1983 bp |
Protein Length | 660 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643381208 |
Product | hypothetical protein |
Protein accession | YP_002264258 |
Protein GI | 209696327 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACACCA CGTTGAAAAG CCTCGGTTGG CTGCTCACTC TTTGTTTATT ACTTGTGGCG GCATTCTTAT CTCTTTTACA TACGCCTTAC GCACAGCCAT TATTGAATCC AGTCGTTGAA AAGTTGACTC ATCAAACGCT CTCCTTTGGT GGGATCTCCT ATTCTATTCA CGATCCTTCG CACCTCACCA TCTCTGATGT CGTGATTCAT TCTGAGCCAG AGCTACCCAT TCAACAAATT GATTTATGGC TTTCTAAGCA TCCAATTCAA AATAATAAAC TCGCTTTTGA TAGTGTGAAA ATTGATGGAA TTAGCCTACA AAACGGACTG CCTAATACTA AAAAACTCAA TTGGTTTTCA ATCTCTCAAC TCAGTATTTC TAATTTAGAT TTTGCAGATG ATGGATTGGT CGTACGTGAA GCACAAATCC AATTAAGTAA CTATGATGTG CATAATGAAA AAGGACTGCC TTTTGAAGGG GGGTTTCAAT TATCTACTCA ACAACTTTAC TGGCAAGGTG AAGCCCTAGA TGACGTCTTA ATAGATGGTT ATTACACTGA AAACTATACG GCATTACAGG GTATTTCATT AACTTGGCGC AATAGCACCA TTACAGCTCA AGCCGAATTA AAAGAAAATA AGTTATGGGT TATTCCTCAA TTTACACTGC GTAAATTTAA TTTAGAATCG GATAATGCCG ACATTATTGG AAAGCCTCTG CAATGGCTTT CAGAACAAGG TTTCACGTAT CAATTCGAAC GAATCGATCT ACTCGATGTG AATATTGAAT TACCTCAATT CTCTGTCAAT GATCTCAGTC TTTCTGCTGA AAACATTCTT CTTCCTTATA AGATTTGGCA GCAAAATAAC GCGAATATTT CCTTTAGTGC CGATAGCTTG GTATGGAAAG ACACCATTAT TAATAAGCCG ATAATAGAGT TAACGCTAAC AAATAAAAAA GCGACTATTT CTAATCTTTC ACTGGATGTT TTTAATGGCA ACATTCAACT TTCAGGACTG CTTTCGCCTA CCACGATCAA TTTATCGTCT CTCACTTTAA ACCAAATAAA ATGGTTAATC AGTCCTCAAG AACTCGATTC AATCAGCAAC TATCTCACTC AATTAGAACA AGTGAACATC GCCAACTTAG ACATTAATAA TTCTCAGATT ATTCAACTTG AAACGGCCCA CCCATTCCAG TTGTCTGGTT TAAACGTAGA AGGTCATGAT CTGGATTTAC TTCGTTATTA TCAATGGGCT TTATGGGACG GAAAATTATC AATAAGTGCT TCAAATGCCA GCTTAAATTA TTTGCTCACT CAACAACTAT TGATCGAAAC AAACACGAAT AATGGACGGT GGACAATAGA GCGCGCTCTA TTCCCATTAA CAGAAGGGTT AATTGGACTA AATGGCAGTA TTAACCTCAA ACAAGACAGT CAGCCATGGC AACTTGAGGC TTATGGTGAT GGTATCCCTC TCTCGGATTT AGCGAAATGG CTTCCCAACC CAATTCCTTT AGAAGGAATG GCTGAATTTA CTTTTTCAGG TAATGGATTA GCGGTAAATA AAGACAGTTT TAATTACAGC TTTGATGGCG ATTTAAACGT TATTCCAAGA GAAACAACAA CAACAGAAAC GGCCAAAGAT TTGTGGCAAC TAAAACTTGG GCTCATTCCA GAAGAAAGCC AATCAGAAAA AGACGTTAGT GCTCAAACAC AACGCAAGAA AGAACATACA ATGGATAAAA AAACCATCTA CCCAATCAAT ATTGAGCCAA TTCATATTTC GGCAAACAGG GGCCGAATTT CAATTAATCC AATAATGATT ACCGGTGACG GATTTAATTA TAATGTGGAA GGGGAGTATG ATTTAGTGAA CCCAGAAAAG GCAGAAACGG TCATCTCATT AACACAAGAA TGCCATCAAA TAGTACAGCG ACTCTTTTCT GATAAAGTCG ATTTAATCAA TTATTGTCAG TGA
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Protein sequence | MYTTLKSLGW LLTLCLLLVA AFLSLLHTPY AQPLLNPVVE KLTHQTLSFG GISYSIHDPS HLTISDVVIH SEPELPIQQI DLWLSKHPIQ NNKLAFDSVK IDGISLQNGL PNTKKLNWFS ISQLSISNLD FADDGLVVRE AQIQLSNYDV HNEKGLPFEG GFQLSTQQLY WQGEALDDVL IDGYYTENYT ALQGISLTWR NSTITAQAEL KENKLWVIPQ FTLRKFNLES DNADIIGKPL QWLSEQGFTY QFERIDLLDV NIELPQFSVN DLSLSAENIL LPYKIWQQNN ANISFSADSL VWKDTIINKP IIELTLTNKK ATISNLSLDV FNGNIQLSGL LSPTTINLSS LTLNQIKWLI SPQELDSISN YLTQLEQVNI ANLDINNSQI IQLETAHPFQ LSGLNVEGHD LDLLRYYQWA LWDGKLSISA SNASLNYLLT QQLLIETNTN NGRWTIERAL FPLTEGLIGL NGSINLKQDS QPWQLEAYGD GIPLSDLAKW LPNPIPLEGM AEFTFSGNGL AVNKDSFNYS FDGDLNVIPR ETTTTETAKD LWQLKLGLIP EESQSEKDVS AQTQRKKEHT MDKKTIYPIN IEPIHISANR GRISINPIMI TGDGFNYNVE GEYDLVNPEK AETVISLTQE CHQIVQRLFS DKVDLINYCQ
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