| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2917 |
|---|
| Symbol | epsK |
|---|
| ID | 6988454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 3160504 |
|---|
| End bp | 3161523 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643381196 |
|---|
| Product | general secretion pathway protein K |
|---|
| Protein accession | YP_002264246 |
|---|
| Protein GI | 209696315 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3156] Type II secretory pathway, component PulK |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGTT CTCATAAAAA TCAAAGCGGA GTTGCGTTGA TTGTTGTATT GCTTCTATTA
GCGATAATGG TGACGATTGC CGCTCAAATG TCAGAGCGTT TGTTTATTCA GTTCCATCGT
GCTGAAAATC AGTTGAATCA TCAACAAGCG TATTGGTATT CCATTGGGGT TGAAGCACTA
GCCAAGGCGG GTATTGAAGA AGCGTACAAA GACGGAGATA CCATTAATTT AAGCCAGATG
TGGGCGACAG AAGAAACAAC GTACCCATTA GATTACGGCG AAGCGTTTGG TGGAGTGAAA
GATAAGCAAG CTTGTTTTAA TTTAAATGCA TTAAGTAATA TAGAACCAAG TGCCGATCCG
TCTGTACGTC CATTTTTAGT GACCGTATGG ATGAATTTAT TGGAATCTGT TGAGGTAGAA
AATTATTTAG CGGAAGTGAT CGCGGATTCT AGCTGGGAAT ACATGGATGC TGATGATGTG
GTTCGTTCGA GCTCTGGTGT TGAAGACAGT ACGTATCAAT CCTTTAAGCC TCCTTATTTA
GCACCAAATG GATGGATTGC AGATGTGAGT GAGTTACGAG CGATTAATGG TGTCACCGCT
GAGGTTTTTA AAGCGGTATC GCCATTAACG TGTGCTATTC CAACGGCGAA CTGGTATTTG
AATGTGAATA CATTACAACC AGAGCAAGCA AACATTTTAG TGGCGTTATT TTCACCGAAT
TTAAGTGAAA GCGATGCTCA AGAGGTATTA GAAAACCGTC CGTTTGATGG CTGGGCAAGT
GTTGAAGATT TTTTATCAGA GTCGGCCATT AATCGAGTGG ATGAGAATAT AAAAACAAAA
GCCAAACCGT ATTTATCAAT AGATAGTCAG TTTTTTGAGT TAGATACTCA AGTATTAGTA
GAAGAATCAC GCGTACGTGT GCGTTCTTTA TTGCACAGCA GTGATAAGAA AGTGGTGAAC
GTTATCCGTC GCCAATATGG AGGAATGAGT GAGCGAACAT CTGATAATAA GGCTGAATAG
|
|---|
| Protein sequence | MNRSHKNQSG VALIVVLLLL AIMVTIAAQM SERLFIQFHR AENQLNHQQA YWYSIGVEAL
AKAGIEEAYK DGDTINLSQM WATEETTYPL DYGEAFGGVK DKQACFNLNA LSNIEPSADP
SVRPFLVTVW MNLLESVEVE NYLAEVIADS SWEYMDADDV VRSSSGVEDS TYQSFKPPYL
APNGWIADVS ELRAINGVTA EVFKAVSPLT CAIPTANWYL NVNTLQPEQA NILVALFSPN
LSESDAQEVL ENRPFDGWAS VEDFLSESAI NRVDENIKTK AKPYLSIDSQ FFELDTQVLV
EESRVRVRSL LHSSDKKVVN VIRRQYGGMS ERTSDNKAE
|
|---|
| |