| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2916 |
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| Symbol | epsL |
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| ID | 6988455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 3159276 |
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| End bp | 3160511 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643381195 |
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| Product | general secretion pathway protein L |
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| Protein accession | YP_002264245 |
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| Protein GI | 209696314 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3297] Type II secretory pathway, component PulL |
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| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGAATAGTC AACCATCAGA TCCCATTCAA TGGATCGTCT GGTCACCAGA ACAAAAAGAA
ATCATCGCTT CGGGCGAATT AGTTTCCTCT GAAACGTTAT CCTCGTTAAC TCAATACGCA
GAACAACGCA TTGTTTCTGT ATTATTGCCG AGCAGTGATG TTTTATTAAG AGAAGTCGCG
ATTCCAGAAG GGGCGGCTCG ACAGTTTTCA TCCATGTTAC CTTTTATTAT TGAAGATGAT
TTGGCTCAGG ATGTAGATGA TTTACATATC GTCATAATAA AGAAAAATAA TAAAACAGCG
CAAATTGCTA TTGTTGAACA TGAAAAAATG GACACTTGGA TTACTCAGTT AAAGGACGCT
GAAATTCACG CTAAACAGTG GTTACCAGAT GTACTCGCTT TGCCTTATCA AGAGGATGGC
TTATCGCTCG TACAATTGAA TGATCAATGG TTGATTCGTC ATCAGGAGCA TCAAGGTGCG
GTAGCTGAAT CGAGTTGGGT TTCTGTATTG TTAGATGGCA TGGTCATCTT CGCGAATGCA
CAGAAGTTAG AAAGCCAGAG TGACGTCGAT GAAGCGGAAA GTGAATCAAC GCCTGTTGTT
GTGATCCATG CTTATTCTCC TTGTGAAATA GAGATCGATA ATGCCGAAGT ACATATAGAA
TCCCCTGAAT TGGTGATGCA GCTATTAGCT GAAGGTGCTA TCCATTCCAA AGTGAATATA
TTAACGGGAA GGTATCGTCC TCAATCGTCT TGGCGCAAAC ACTGGCGGAT ATGGCAAAAA
GTGATTCTGG CGTTTGGTTT AGTGATGGTT GCGTTTGTTG GACAGCATAT TTCTGAAGTG
CAAAAATTAG AACAACACAG TGTTGCTCTT CGAGCTGAAA GTGAACGTAT TTTTCGTGAA
ATTTTTCCAG CGAAACGAAA AATACCAACC TCAAGTTATC TGAAGTCTCA AATTAAAAAT
GAAGAGATGC GCTTGCAAGG TGGAGCGGGA GGGAACGATC TTTTAGGCTG GATGGCCGAG
CTTCAACCTT ATTTAGCAAA GGTGCCTCAA GTTAAACTAA AAAGTTTAAA ATTTGATGGA
AAGCGTGATG AGTTACGCCT TCAAGCCAGT GCTGCTGATT TTCCTTATTT TGAGCAATTG
ACGTCAGAAT TGGGCACTCA ATTTGTGGTC GAACAAGGAC AACTTAATAA AAACCAAGGC
GAAGTTTTTG GTGCCATTGT CATTAGGAGA AAATAA
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| Protein sequence | MNSQPSDPIQ WIVWSPEQKE IIASGELVSS ETLSSLTQYA EQRIVSVLLP SSDVLLREVA
IPEGAARQFS SMLPFIIEDD LAQDVDDLHI VIIKKNNKTA QIAIVEHEKM DTWITQLKDA
EIHAKQWLPD VLALPYQEDG LSLVQLNDQW LIRHQEHQGA VAESSWVSVL LDGMVIFANA
QKLESQSDVD EAESESTPVV VIHAYSPCEI EIDNAEVHIE SPELVMQLLA EGAIHSKVNI
LTGRYRPQSS WRKHWRIWQK VILAFGLVMV AFVGQHISEV QKLEQHSVAL RAESERIFRE
IFPAKRKIPT SSYLKSQIKN EEMRLQGGAG GNDLLGWMAE LQPYLAKVPQ VKLKSLKFDG
KRDELRLQAS AADFPYFEQL TSELGTQFVV EQGQLNKNQG EVFGAIVIRR K
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