| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2886 |
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| Symbol | |
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| ID | 6987960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 3130386 |
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| End bp | 3132242 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643381165 |
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| Product | putative outer membrane associated TonB dependent receptor |
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| Protein accession | YP_002264216 |
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| Protein GI | 209696285 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0141972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CTGCCCTTGC GACTGCAATA GTGTCGCTGC TTTCTCACGC CTATACCTCT
CCTGCATTTG CAAAAGATTC AGTATCTGAA ACAGACGAAG TGATGGTGGT TACTGCCAAT
CGATTTGAGC AGTCGGCTAA AGATGTGATT GCACCAATGA GTGTCGTTAC AAAAGAAGAT
ATTGTTCAGA TTCAAGCTAA AACAATTACA GATATTCTCA GACTTCAACC AGGTATTGAG
GTCGCGAGTA ATGGTGGCAT TGGTCAGAAT GCATCTATAT TCATGAGAGG GACTAACTCT
GATCATGTTC TTGTTTTAAT CGACGGTTTT AGAATGAACA GTTCCATTAA AAGTGGAATG
AATATTAATA AAATACCGGT TAATCAAATT GAGCGAATAG AAATTATTCG AGGCTCAGGC
GCTGTTATGT ATGGTTCTGA TGCGGTAGGT GGTGTAATTA ATATTATTAC TCGCACCGCT
ACGAATGATT TGTCAAAATC AGCAACGATT GGTGCAGGGA GTAATAAGTA TAAAGAAGGA
AACTTTGCGG CTAACACTAA TGTTGGAGAT AAAGGGCATT TAAAGATTGC TGCTGGCTTC
ACTCAAACGG AAGGGTATAA CGTAAACCCG CAACCGGGAT TGAATGATGG TGACAAACAT
GGTTTTGAAA ATAACCAGTT TATGCTGAAC TATGAACATC AATTTAGCTC AAACTTAAGT
TTATTCACCG GTATTCGTTG GTTCAACAGC ACTTCTGAAT ACAATCATTA TACAAACACA
AAATCTCAGT CTGAATCCGA ATCTATGGCG TACTCAGCAA AAGTCTCTTA TAAAAAAGAT
GCGTTGTTAT CTGATTTAAG TTTCAGTTAC CAAGATAATG AAACGTTAGA GTACCTTGAG
AATGGGTCTT TAGATTCAGA ACAAAAAATA GATCAACTTA ATGCGCAATG GACAAACCAA
TATAAGTTAA TGGATTCATG GTTTGTGAAT GCAGGGATTG ATTGGACAAA TGAACAAGTA
AAAGCTGATA TTACTAACTT TTCGCATCAA GTCATTATCG ATGAAGGTGA GAGTCGAATG
TCGACGGGTG TGTATTTAGG GACCGAGTAT CAGCTAGAGA AGTTAACCTT AGAAGCGAAC
ACTCGATTTG ATAAACATGA TAAACATGAT AAATACGATG AGTATGTAAC TTGGGGAGTT
GGTGCAAGCT ATCAGATTAA CGAAATTTAT CGTATCAGTA GTGCGTATAA TACGGCATTT
AAAGCCCCAT CGTTCTATGA TTTATCAACG GCACCTGATT TAGAACCAGA AACATCAGAT
AATATTGATG TTGGGTTAGC GGCTGAATAT GCATTGGTAA GTGTTAATTT GTCATTGTAT
AAAAACAAAG TAGATAATTT GATTATTTAC TATGACGCAC CAAACTACAT GGGTTATAGC
GCTAATGTAG ATGCGGATAT CAAAGGTGCA GAACTGGAAT TGCTATTTGA TACTGGTATT
GTGTCTCATA CCGTGATTGC TGAGTATAAA GATCACGAAG ATACACAAGG ACAACAGTTA
GCACGAAGAG CGAAGCAAAA CTATAAATGG ATTAGTAACG TGAGTTTCGG TGATTTAGAT
ATGAACTTGT CTTATATATA CACGGGGAAA CGTTCTGATC TTCCTTCTGC CCCTGGTGTA
GCAACGAATT ATTTAGATCC TTATTCTTTA TGGACATTGG CGGGCGCTTA TTGGGTAACT
ACCGAATTAG CAGTGCGTGG TCGAGTGGAA AATTTGCTTG ATGAAGAATA TGAAACCGCG
GGAGGGTACA AACCTGCAGA GCGTTCTTAC TATGTCAGCT TAGATTATCA ATTTTAA
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| Protein sequence | MKKTALATAI VSLLSHAYTS PAFAKDSVSE TDEVMVVTAN RFEQSAKDVI APMSVVTKED
IVQIQAKTIT DILRLQPGIE VASNGGIGQN ASIFMRGTNS DHVLVLIDGF RMNSSIKSGM
NINKIPVNQI ERIEIIRGSG AVMYGSDAVG GVINIITRTA TNDLSKSATI GAGSNKYKEG
NFAANTNVGD KGHLKIAAGF TQTEGYNVNP QPGLNDGDKH GFENNQFMLN YEHQFSSNLS
LFTGIRWFNS TSEYNHYTNT KSQSESESMA YSAKVSYKKD ALLSDLSFSY QDNETLEYLE
NGSLDSEQKI DQLNAQWTNQ YKLMDSWFVN AGIDWTNEQV KADITNFSHQ VIIDEGESRM
STGVYLGTEY QLEKLTLEAN TRFDKHDKHD KYDEYVTWGV GASYQINEIY RISSAYNTAF
KAPSFYDLST APDLEPETSD NIDVGLAAEY ALVSVNLSLY KNKVDNLIIY YDAPNYMGYS
ANVDADIKGA ELELLFDTGI VSHTVIAEYK DHEDTQGQQL ARRAKQNYKW ISNVSFGDLD
MNLSYIYTGK RSDLPSAPGV ATNYLDPYSL WTLAGAYWVT TELAVRGRVE NLLDEEYETA
GGYKPAERSY YVSLDYQF
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