| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2857 |
|---|
| Symbol | csgE |
|---|
| ID | 6988354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 3094644 |
|---|
| End bp | 3095105 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 643381132 |
|---|
| Product | assembly/transport component in curli production, CsgE precursor |
|---|
| Protein accession | YP_002264189 |
|---|
| Protein GI | 209696259 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.121415 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAT ATATTTTATT TAAAGTACTT ATGGCGTTAC TTTTTTCTTC TCTATCGAAT
GCTTCTGAAA GCAAAGCAGC ATTAGAAAAT TCGACACCAT TAGAAAAAGA CAAGGTAAAT
GAGGTTGATG ACCTTGTTGA GATTGATGGG TTAATTATTG ATCGTACTTT AACTCGATTA
GGAAAAGATT TTTATTTTTC TTTTTCCATA AAAATGAACA GTAAATACGA TGATCTAGGC
GTGAACTTAA CTGTAAAAGA GAGACCAACA GCATTATCTG GCAGCATTAT CGGGGTTTAC
CATTTTGATA AGGTGATTTA TCGAGGCGCT CTTTCTCCAG GTCAAAGACA AGCAGAAGAG
AAAGCAGAGC AAGCAGTAGA AGCGGTTAAT CAATATATCG TGAAATGGCA AACAGAAAAA
TTATTTAAAG ATACATATGA TCTCGATTTT CCGGAGATCT AA
|
|---|
| Protein sequence | MNKYILFKVL MALLFSSLSN ASESKAALEN STPLEKDKVN EVDDLVEIDG LIIDRTLTRL
GKDFYFSFSI KMNSKYDDLG VNLTVKERPT ALSGSIIGVY HFDKVIYRGA LSPGQRQAEE
KAEQAVEAVN QYIVKWQTEK LFKDTYDLDF PEI
|
|---|
| |