Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2845 |
Symbol | |
ID | 6987942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 3084535 |
End bp | 3085239 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643381122 |
Product | putative lipoprotein |
Protein accession | YP_002264179 |
Protein GI | 209696249 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00807685 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGCA TTCTATCCAC CTTACTTCTC TCCGCATTTC TTTTTGGCTG TTCATCTAAT CCATTAGACG AACAACGCAT AAAACCAACG GTCTTGACTG GTGGTCAAAT CCAAGGTGAC GCAACGAGTT ACTATTGGTA TACACGTCGT TTACAACAAC CTGTTATTGC TTCTGATTAC GTCACAATGG GTGATTATGG TTGGTATAAA ACAACATATC GTTGGGAAAA AAGCACACTG GTTGAAGCCG TTCGTGAAGG CGAGATGCTT GATGGTAGTG ATGGACTCAT TCCTTACATG ATGCATGTTC GCTATAACAG CAATGGTGAA GCGGTATATC AGCGTTATCG TAAAGATGGA AAAATATTCC CGTTAATGCC AAATCAATTA ACTCAGTTTC AAGATCAATC CAAATACTTA ATTGCGAAAG TGGAAGAGTT AAATAAGAAT GATAACTCGT TATTCCAAGG TGAGTGGGAT GGTGAAACAT TTTACTCGTG TGATGGTAAG CAATACGATC AATTAGAGTT TAATCAAATA TTGCCTAACT TTGTGGTGGC TCGACTTTCA GGGCTAGACA GTTTTATTTC GTTTTTAGGC ACCACTGAAA ATAAAGATAA AGCAGTATTA AAAATGTCCG AATTATTACT ATTAACAGAC GACAGTTCTA CCTGTATAGA ACGCCCTGAA CTGATTCAAG AGTAA
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Protein sequence | MKRILSTLLL SAFLFGCSSN PLDEQRIKPT VLTGGQIQGD ATSYYWYTRR LQQPVIASDY VTMGDYGWYK TTYRWEKSTL VEAVREGEML DGSDGLIPYM MHVRYNSNGE AVYQRYRKDG KIFPLMPNQL TQFQDQSKYL IAKVEELNKN DNSLFQGEWD GETFYSCDGK QYDQLEFNQI LPNFVVARLS GLDSFISFLG TTENKDKAVL KMSELLLLTD DSSTCIERPE LIQE
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