| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2838 |
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| Symbol | dusB |
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| ID | 6989010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 3077458 |
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| End bp | 3078426 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643381115 |
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| Product | tRNA-dihydrouridine synthase B |
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| Protein accession | YP_002264172 |
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| Protein GI | 209696242 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00370185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAGATAG GTAAATATAC ATTAAAGAAC AATCTTATCG TTGCTCCTAT GGCTGGTGTG
ACTGATAAAC CTTTTCGTGA GTTATGTATG CGTTACGGCG CAGGCATGGC TGTGAGCGAG
ATGATGTCTT CTAATCCAAA ACTGTGGAAA ACATCTAAGT CCCAAAATCG CATGGTACAT
GAAGGTGAAT CTGGTATTCG CTCGGTACAA ATTGCAGGGG CAGATCCTAA GTTAATGGCG
GAAGCAGCGC GATACTGTGT TGAGACTGGT GCGCAAATCA TCGATATCAA TATGGGATGC
CCTGCTAAGA AAGTGAATAA GAAGCTTGCA GGCTCAGCGC TCCTACAACG CCCAGATTTG
ATTGAAGAGA TCTTACTGGC AGTTGTGAAA GCGGTTGATG TTCCTGTCAC TCTGAAAACG
CGTACAGGCT GGGATCCGGA CAATAGAAAC TGTGTTCAGG TTGCAAAAAT GGCAGAACAA
TGCGGCATTC AAGCTTTAGC GCTCCATGGG CGTACCAGAG CTTGTATGTA CAAAGGTGAT
GCTGAGTACG ACAACATTAA AGCGGTAAAA GAAGCGATTT CGATTCCGGT TATAGCAAAC
GGTGATATTG ACTCACCGGA AAAGGCTCGT TTTGTGCTTG ATTACACCGG CGCAGACGCT
TTAATGATCG GCCGACCTGC ACAAGGTAGG CCATGGATTT TTCAAGAAAT CCAACATTAT
TTAGAAACGG GCGAATTCAT GCCACCTCTT CCAATTGAAG AAGTGAAGGC CACTTTATTG
GGTCATGTTC AAGCGCTTCA CCTATTTTAT GGTGAGTTTT TAGGCCCTCG CATTGCTCGT
AAGCATGTGG GTTGGTATTT AAAAGAGCAC GAACAAGCAA ATGAATTCCG CCGCGGCTTT
AATGCTATTG AAGATGCCCA TCAGCAACTT CAACAGCTTG AAAGCTATTT CGACCACGTT
GCATCATAA
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| Protein sequence | MQIGKYTLKN NLIVAPMAGV TDKPFRELCM RYGAGMAVSE MMSSNPKLWK TSKSQNRMVH
EGESGIRSVQ IAGADPKLMA EAARYCVETG AQIIDINMGC PAKKVNKKLA GSALLQRPDL
IEEILLAVVK AVDVPVTLKT RTGWDPDNRN CVQVAKMAEQ CGIQALALHG RTRACMYKGD
AEYDNIKAVK EAISIPVIAN GDIDSPEKAR FVLDYTGADA LMIGRPAQGR PWIFQEIQHY
LETGEFMPPL PIEEVKATLL GHVQALHLFY GEFLGPRIAR KHVGWYLKEH EQANEFRRGF
NAIEDAHQQL QQLESYFDHV AS
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