Gene VSAL_I2824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2824 
Symbol 
ID6987930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp3058924 
End bp3059553 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content42% 
IMG OID643381101 
Producttranscriptional regulator, LuxR response regulator receiver 
Protein accessionYP_002264158 
Protein GI209696228 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGACA ACTACACCAT CATTATCGCG GACGATCATC CCTTATTTCG CAATGCGCTT 
TTTCAATCCA TTCATATGGC GATCAGCGGA GCCAATCTAC TCGAAGCCGA TTCTCTAGAT
GCACTCTTAA CCGTATTAGA AAAAGAGCCC GATCCCGACT TATTATTACT CGATCTTAAA
ATGCCGGGCA GTAACGGAAT GTCTGGTTTA ATTCACCTTC GCTCTCAATA TCCAGACCTG
CCTATTGTGG TTGTCTCTGC CAGCGAAGAA AGCAGCATTG TCTCTCAAGC AAAGAGCCAT
GGGGCTTTTG GCTTTATTCC AAAATCAAGT GACATGCGAT CATTAATTTC AGCGTTGAAC
CAAATTTTGG CAGGGGATTC TTATTTTCCA GAAGGCTCAA TTAAAAACAA CCAGGCGTGT
GATGATCTCG CGACAAGAAT CAGCAGTCTT ACTCCTCAGC AATATAAAGT GCTTGGTATG
CTGTCAGATG GCCTACTCAA CAAGCAAATT GCGTATGATT TAGACGTATC AGAAGCAACG
ATCAAAGCTC ACATGACCGC AATTTTTCGA AAATTAGGCG TAAAAAATCG TACTCAAGCG
GTTATTTTTC TACAACAGAC TGAAAGTTAA
 
Protein sequence
MDDNYTIIIA DDHPLFRNAL FQSIHMAISG ANLLEADSLD ALLTVLEKEP DPDLLLLDLK 
MPGSNGMSGL IHLRSQYPDL PIVVVSASEE SSIVSQAKSH GAFGFIPKSS DMRSLISALN
QILAGDSYFP EGSIKNNQAC DDLATRISSL TPQQYKVLGM LSDGLLNKQI AYDLDVSEAT
IKAHMTAIFR KLGVKNRTQA VIFLQQTES