Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2824 |
Symbol | |
ID | 6987930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 3058924 |
End bp | 3059553 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643381101 |
Product | transcriptional regulator, LuxR response regulator receiver |
Protein accession | YP_002264158 |
Protein GI | 209696228 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGACA ACTACACCAT CATTATCGCG GACGATCATC CCTTATTTCG CAATGCGCTT TTTCAATCCA TTCATATGGC GATCAGCGGA GCCAATCTAC TCGAAGCCGA TTCTCTAGAT GCACTCTTAA CCGTATTAGA AAAAGAGCCC GATCCCGACT TATTATTACT CGATCTTAAA ATGCCGGGCA GTAACGGAAT GTCTGGTTTA ATTCACCTTC GCTCTCAATA TCCAGACCTG CCTATTGTGG TTGTCTCTGC CAGCGAAGAA AGCAGCATTG TCTCTCAAGC AAAGAGCCAT GGGGCTTTTG GCTTTATTCC AAAATCAAGT GACATGCGAT CATTAATTTC AGCGTTGAAC CAAATTTTGG CAGGGGATTC TTATTTTCCA GAAGGCTCAA TTAAAAACAA CCAGGCGTGT GATGATCTCG CGACAAGAAT CAGCAGTCTT ACTCCTCAGC AATATAAAGT GCTTGGTATG CTGTCAGATG GCCTACTCAA CAAGCAAATT GCGTATGATT TAGACGTATC AGAAGCAACG ATCAAAGCTC ACATGACCGC AATTTTTCGA AAATTAGGCG TAAAAAATCG TACTCAAGCG GTTATTTTTC TACAACAGAC TGAAAGTTAA
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Protein sequence | MDDNYTIIIA DDHPLFRNAL FQSIHMAISG ANLLEADSLD ALLTVLEKEP DPDLLLLDLK MPGSNGMSGL IHLRSQYPDL PIVVVSASEE SSIVSQAKSH GAFGFIPKSS DMRSLISALN QILAGDSYFP EGSIKNNQAC DDLATRISSL TPQQYKVLGM LSDGLLNKQI AYDLDVSEAT IKAHMTAIFR KLGVKNRTQA VIFLQQTES
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