Gene VSAL_I2813 details

Gene Information

• Locus tag: VSAL_I2813
• Symbol: mtlA
• ID: 6988878
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 3046322
• End bp: 3048274
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643381090
• Product: PTS system, mannitol-specific EIICBA component
• Protein accession: YP_002264147
• Protein GI: 209696217
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2213] Phosphotransferase system, mannitol-specific IIBC component; [COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain
• TIGRFAM ID: [TIGR00851] PTS system, mannitol-specific IIC component

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATATCAC CAGATGCAAA GATCAAGATA CAAAATTTTG GTCGTTTTTT ATCAAATATG 
GTAATGCCTA ACATTGGTGC GTTTATCGCA TGGGGCTTTA TCACAGCTTT ATTTATTCCG 
ACTGGTTGGA TCCCTAACGA AGAGTTAGCA AAACTAGTTG GCCCAATGAT TACTTATTTA 
CTTCCACTGC TTATCGGTTA TACCGGTGGG AAATTAGTGG GCGGCGAACG TGGTGCCATT 
GTTGGTGCAA TTACCACTAT GGGTGTGATT GCTGGTACTG ATATCCCAAT GTTCATGGGC 
GCAATGATGG TGGGTCCTAT GGGCGGCCTA GCGATTAAAC TGTTCGACCA AAAAGTCGAT 
GGTAAAATCA AAAACGGCTT TGAAATGCTA GTTAACAACT TTTCTGCCGG CATCATTGGT 
ATGTTGTGTG CAATTGTTGC TTTTTTCTTC ATTGGTCCTT TTGTTAAGGT CTTATCTGCA 
GGTCTTGCTG GGGGGGTTAA CTTCTTAGTC GATGCAGGTC TTCTGCCTTT AACTTCTATT 
TTTGTTGAAC CAGCAAAAAT TCTATTCCTG AATAACGCCA TTAACCACGG TATCTTTTCT 
CCTCTAGGTA TCCAACAGGC AAACGAAACT GGCCAATCTA TCTTCTTCTT AATTGAAGCA 
AATCCAGGAC CTGGCTTAGG TATTCTTCTT GCTTATATGT TCTTTGGTAA AGGCACAGCA 
AAACAAACCG CTGGTGGTGC ATCTATCATT CACTTCTTTG GTGGTATTCA CGAAATTTAC 
TTCCCATACA TTCTTATGAA CCCGCGCTTA ATTCTTGCAG CGATTGCTGG TGGCATGACA 
GGAGTATTCG TTCTAACTCT GTTTAATGCA GGTATGGTTG CTCCAGCGTC TCCAGGCTCT 
ATCTTTGCCA TCTTACTATT GACACCTAAA GCCTCTGCGC TTGGCGTTAT CTGTTCAATT 
TTATCTGCGA CTGCCGTTTC ATTTACTGTT GCCGCAATCC TAATGAAAAC TCAAGCGACA 
TCAGATGAAA ATGACGGAAC ATCACTCGAT GATGCGACAT CAAAAATGCG TAATATGAAA 
TCTGATTCAA AAGGTCAACC TTCTGGTATC ACTGCTGAAA AAAGTAACTC AACAAAATTC 
AATAACATCC AAAAAATCAT CGTAGCGTGT GACGCAGGCA TGGGGTCAAG TGCAATGGGC 
GCTGGTCTGC TTCGTAAAAA AGTACAAGCA GCAGGCTTAA AAATCAGCGT AACAAACTGT 
GCTATCAATA ACTTGCCTAC GGATGTCGAT ATTGTGATTA CTCATAAAGA TTTAACGGAC 
CGTGCACGTA AGCACGCAGA AAACGCAGAG CATATTTCAT TAACGAATTT CTTAGATAGC 
CATATCTATA ACGATTTAGT CGCTCGTATC ATGGCCTCTA CTTATCCAAA AGCGGCAAAT 
GATGATGAGA TGCCACACGT TTCTCCAGTG GCAGCAAATG ACGATTTCTT TGAACCACAA 
AATGCACACC CTTTCCAAAT CGAGTCAAAA AACATCCATC TTGGATTAAC ATGTAAAACG 
AAAGAAGAAG CCATTCAATA CGCAGGAGAG CAGCTCGTTT CACTGGGTTA TGCTGAACCA 
GAATATGTAT CGGCGATGTT TGATCGTGAA AAACTTGTCT CCACTTACCT TGGCGAATCT 
ATTGCCGTAC CACACGGAAC AATAGAAGCC AAAGACCGAA TAATCAAAAC AGGCATTGTT 
ATCTGTCAGT ACCCATCAGG TGTTCAATTC ACTGAAGACG GTGATGATAT CGCTAAATTG 
GTTATTGGTA TTGCTGCAAA AAATGATGAA CACATTCAAG TAATTACTGC AATTACGAAT 
GCACTTGACG AACCTGGTGC CATCGAAAAA CTAACATCGA CTAACAGCGT TAATGAGGTT 
TTAGAGATTC TTTCAGGCGA ACAAGCAGCA TAA 

 

Protein sequence

MISPDAKIKI QNFGRFLSNM VMPNIGAFIA WGFITALFIP TGWIPNEELA KLVGPMITYL 
LPLLIGYTGG KLVGGERGAI VGAITTMGVI AGTDIPMFMG AMMVGPMGGL AIKLFDQKVD 
GKIKNGFEML VNNFSAGIIG MLCAIVAFFF IGPFVKVLSA GLAGGVNFLV DAGLLPLTSI 
FVEPAKILFL NNAINHGIFS PLGIQQANET GQSIFFLIEA NPGPGLGILL AYMFFGKGTA 
KQTAGGASII HFFGGIHEIY FPYILMNPRL ILAAIAGGMT GVFVLTLFNA GMVAPASPGS 
IFAILLLTPK ASALGVICSI LSATAVSFTV AAILMKTQAT SDENDGTSLD DATSKMRNMK 
SDSKGQPSGI TAEKSNSTKF NNIQKIIVAC DAGMGSSAMG AGLLRKKVQA AGLKISVTNC 
AINNLPTDVD IVITHKDLTD RARKHAENAE HISLTNFLDS HIYNDLVARI MASTYPKAAN 
DDEMPHVSPV AANDDFFEPQ NAHPFQIESK NIHLGLTCKT KEEAIQYAGE QLVSLGYAEP 
EYVSAMFDRE KLVSTYLGES IAVPHGTIEA KDRIIKTGIV ICQYPSGVQF TEDGDDIAKL 
VIGIAAKNDE HIQVITAITN ALDEPGAIEK LTSTNSVNEV LEILSGEQAA