Gene VSAL_I2811 details

Gene Information

• Locus tag: VSAL_I2811
• Symbol: dipZ
• ID: 6988394
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 3042841
• End bp: 3044715
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 643381088
• Product: thiol:disulfide interchange protein precursor
• Protein accession: YP_002264145
• Protein GI: 209696215
• COG category: [C] Energy production and conversion; [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4232] Thiol:disulfide interchange protein

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAATT TACTCCGATT TAGAGCCGCC CTTTTATCAT TCTTCATTTT ATTTGCGTCC 
TTTGCACCCC AAGCGGTTGC GGCTTTTGAT TTAACTAAAC TACAAAATCA ACAAGACTCT 
TCTTTTGTGA CCGTAAATGA AGCCTTCCCA TTCAACTTCA TGCAACAAGG GGATCGCGTC 
TATTTAGATT GGCAAGTAAA ACCTGATTAT TACTTATATC AGCAGCGTAT TTCAGTCTCA 
GCGCATGATG CTAACATTGC CGACTTAGTC ATGGAACAAG GCACGCCTCA TAACGATGAA 
TTTTTTGGTG ATGTTAATAT CTACACCAAG CCATTGACCA TCACTGTGCC ACTCATCTCA 
GTCGATAAAG ATGCAGAGCT AACCGTTCGT TATCAAGGGT GTGCAAAAGC AGGATTCTGT 
TATCCACCAG AAATCCGTAA AATCCCATTA TCCATGCTCA CAGCCTCAAG CTCAAGCTCA 
TACCAAAACG AAACGGCAAA TACTCATGTG GTAGCCAAAA GCGAAACCGC ACCAGTGAGC 
GTAGAAAAAG CGACATCACC ATCGGTAAAT AGTCTAAATA CCGCTGGTAT TCAACAACCA 
AAAAATCAAA CTCAACAGCA AGCGCTTGCA AGCGATCTGG GTGATGCTTG GTGGACTCCG 
TTTTTATTCT TAGCGTTAGG TATTGGTCTT GCGTTTACTC CTTGTGTGTT ACCTATGTAC 
CCTATTTTAA CGGGCATTGT TTTAGGTGGC GGTAAACTTT CTCACGGTAA AGCCTTCAAA 
CTGTCTTTTG TCTATGTTCA AGGCATGGCT CTTACTTACA CCTTACTTGG GTTAGTCGTT 
GCTTCTGCCG GTCTACAATT CCAAGCAGCA TTACAACATC CCTACGTTCT TATTGGTTTG 
AGTGTGATGT TTGTGCTGTT GGCACTGTCC ATGTTTGGTG TTTACACCAT TCAATTACCA 
AGCAGCTTAC AAACCAAATT AAACGACATC AGTAACCAAC AAAAAGGCGG TAACTTAGGT 
GGCGTATTTG CGATGGGTGC GATCTCTGGT TTAGTGTGCT CACCATGTAC GACTGCACCA 
CTGTCTGGTG CGTTACTTTA TGTAGCAAAA AGTGGGGACT TACTAACAGG CGCTGTTGCG 
TTGTATGCCT TAGCGATTGG TATGGGTATC CCATTAATTT TAGCCGCAGT ATTTGGTAAT 
AAGCTACTAC CAAAAGCAGG CGTATGGATG ACGTATGTGA AAACCCTATT TGGTTTTATT 
CTTCTCGCGG TTCCAGTCTT CTTATTAGAG CGAATTCTTC CTCATAACAT CACGCCATTT 
ATTTGGTCTG CTCTTGGGAT CGTAGCATTT GGTTGGTTAT ATCATGTCAA AGCAACGATG 
CCCCAATCAT GGAAAACAAG TGTTGCTGGT ATCATCGCTA TTTTAGGTAT CGTCGGCTCA 
GCTATTCCTG TCATCGATGC CATATCAGGG AAAACATCGA GCCAAGTTGC CACTACTCAA 
GCGGTAGCCT TTAAGCGCAT CTCTACTATT GATGAATTAA ACAAAGAGCT TAAGGTAGCA 
AAAATTCAAG GCAAGCCTGT GATGCTCGAT TTCTATGCAG ATTGGTGTGT CGCTTGTAAA 
GAATTTGAAA AATACACCTT TCATGATGAA AACGTTGAAC CGTTACTATC CAACTTTATT 
TTGTTGCAAG CCGATGTCAC CAAAAACAGC CCAGTTGATA TTGAATTATT AAAACAACTT 
AAGGTGTTAG GTTTGCCTAC CATAGATTTT TGGAATGCAA ATGGCGATTA TTTATCAGAC 
TCTCGTCTTA CGGGATTCAT GAAAGCAGAG CCGTTTATTC AGCATTTGCA ACAAAATGTG 
AGCTTGGTTG AATAA 

 

Protein sequence

MTNLLRFRAA LLSFFILFAS FAPQAVAAFD LTKLQNQQDS SFVTVNEAFP FNFMQQGDRV 
YLDWQVKPDY YLYQQRISVS AHDANIADLV MEQGTPHNDE FFGDVNIYTK PLTITVPLIS 
VDKDAELTVR YQGCAKAGFC YPPEIRKIPL SMLTASSSSS YQNETANTHV VAKSETAPVS 
VEKATSPSVN SLNTAGIQQP KNQTQQQALA SDLGDAWWTP FLFLALGIGL AFTPCVLPMY 
PILTGIVLGG GKLSHGKAFK LSFVYVQGMA LTYTLLGLVV ASAGLQFQAA LQHPYVLIGL 
SVMFVLLALS MFGVYTIQLP SSLQTKLNDI SNQQKGGNLG GVFAMGAISG LVCSPCTTAP 
LSGALLYVAK SGDLLTGAVA LYALAIGMGI PLILAAVFGN KLLPKAGVWM TYVKTLFGFI 
LLAVPVFLLE RILPHNITPF IWSALGIVAF GWLYHVKATM PQSWKTSVAG IIAILGIVGS 
AIPVIDAISG KTSSQVATTQ AVAFKRISTI DELNKELKVA KIQGKPVMLD FYADWCVACK 
EFEKYTFHDE NVEPLLSNFI LLQADVTKNS PVDIELLKQL KVLGLPTIDF WNANGDYLSD 
SRLTGFMKAE PFIQHLQQNV SLVE