| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2802 |
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| Symbol | secB |
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| ID | 6988620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 3033990 |
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| End bp | 3034472 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643381081 |
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| Product | preprotein translocase subunit SecB |
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| Protein accession | YP_002264138 |
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| Protein GI | 209696208 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1952] Preprotein translocase subunit SecB |
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| TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.221932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGAAG CAGCACAACA AGAACAACAA AACTTTGCAA TTCAACGTAT CTTCTTAAAA
GATGTTTCTT TTGAAGCGCC TAACTCTCCA AACATGTTCC AAAAAGAGTG GAATCCAGAC
GTTAAACTGG ATCTTGATAC TCAAAGTCGT GAACTTGGTG AAGGTGTTTA CGAAGTAATC
TTACGTTTAA CTGTAACGGT TAAAAACGAA GAAGAAACTG CATTCTTATG TGAAGTTCAA
CAAGGTGGTA TCTTTACTGC TGGTCAAATG GAAGAAGCTC AGCTAGCACA TTGTCTAGGT
GCATTCTGCC CGAACATTCT TTTCCCATAC GCTCGTGAAA CGATCTCTAG CCTAGTGGTT
AAAGGTACGT TCCCACAACT TAACCTTGCG CCTGCTAACT TTGACGCATT GTTCATGAAT
TACCTACAAA ACCAAGCTTC AGAAACCGCA GAAGCACCCG CTGAAGCACC CGCTGAAGCG
TAA
|
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| Protein sequence | MAEAAQQEQQ NFAIQRIFLK DVSFEAPNSP NMFQKEWNPD VKLDLDTQSR ELGEGVYEVI
LRLTVTVKNE EETAFLCEVQ QGGIFTAGQM EEAQLAHCLG AFCPNILFPY ARETISSLVV
KGTFPQLNLA PANFDALFMN YLQNQASETA EAPAEAPAEA
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