| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2797 |
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| Symbol | cpxR |
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| ID | 6987921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 3029199 |
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| End bp | 3029882 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643381076 |
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| Product | transcriptional regulator, CpxR |
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| Protein accession | YP_002264133 |
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| Protein GI | 209696203 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000288823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAGA TTTTATTGGT TGATGATGAT GTAGAGCTAA CCGCATTATT AAAAGATATT
TTAAACTTAG AAGGCTACAC CGTTGTTGAA GCCAATAATG GTATTGAGGG ATTAAACGCC
ATTACCGATG ATCTTGACCT TATTTTACTT GATATCATGA TGCCTAAAAT GAACGGCATG
GACATGTTAC GTAAACTGAG AGAAACCAAC GAAACTCCCG TATTGATGCT GACCGCTAAA
GGCGAAGAAA TTGATCGAGT GATCGGCCTA GAGTTAGGCG CCGATGATTA CCTACCAAAG
CCGTTCAGTG ATAGAGAGCT GCTTGCTAGA ATTAGAGCAA TCTTACGTCG CACTCAAGGT
AAAACAAAAG AAAATCACAC TAATAGCATT AAATATCAAG GTATTGAGAT ATTTATAGGC
AAGCAAGAAG CTTACAGCCA TGGGGAATTG CTTGATCTTA CAGGCACCGA ATTTGGGTTA
CTGGCTCAAT TTATACAAAA CCCAGGCTCC ATTATTTCAA AAGAAGAATT AAGCTTAGAA
GTATTAGGAA AACGCCTCGC GCCTTTTGAT CGCGCAATTG ACATGCACGT CTCTAATCTC
AGAAAAAAAT TGCCTCCATT AGCTGAAGGA AAACCACGAA TTAAAACACT CCGTGGTCGT
GGCTACTTAT TTGTTGAGGA ATAA
|
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| Protein sequence | MAKILLVDDD VELTALLKDI LNLEGYTVVE ANNGIEGLNA ITDDLDLILL DIMMPKMNGM
DMLRKLRETN ETPVLMLTAK GEEIDRVIGL ELGADDYLPK PFSDRELLAR IRAILRRTQG
KTKENHTNSI KYQGIEIFIG KQEAYSHGEL LDLTGTEFGL LAQFIQNPGS IISKEELSLE
VLGKRLAPFD RAIDMHVSNL RKKLPPLAEG KPRIKTLRGR GYLFVEE
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