| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2788 |
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| Symbol | |
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| ID | 6987918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 3020995 |
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| End bp | 3022848 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643381067 |
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| Product | fumarate reductase flavoprotein subunit |
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| Protein accession | YP_002264124 |
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| Protein GI | 209696194 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01176] fumarate reductase, flavoprotein subunit
[TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAATT TAATTTTTTA TCTTTTATCC CGGAGAATAA CTGTGAAAAC TATAACCACA
GATATTGCAG TGATCGGCGC GGGCGGTGCA GGTCTACGTA CCGCTATAGC AGCAGCAGAA
GCGAACCCAG AGCTAAACAT TGCTCTAATC TCAAAAGTTT ACCCAATGCG TTCGCACACT
GTTGCCGCTG AAGGTGGATC CGCAGCCGTG ACCAAGGAAG AAGATACACT AGACAATCAC
TTCAACGATA CCGTTGGTGG TGGTGATTGG CTGTGTGAAC AGGATGTTGT TGAATACTTT
GTAAAAAATG CATACCGCGA GATGACTCAA TTAGAACAAT GGGGTTGTCC TTGGAGCCGT
AAAGAAAATG GCGAAGTAAA CGTTCGTCGT TTTGGTGGTA TGAAAGTTGA ACGTACGTGG
TTTGCTGCCG ATAAAACGGG CTTCCACATG CTTCATACTC TGTTCCAAAC TTCAATGAAA
TACCCTCAGA TCAATCGTTA TGATGAGTAC TTCGTTGTCG ATCTTCTTGT TGAAGATGGT
CAAGTTCAAG GTTTGATTGC TATTCACATG GCTGAAGGCG AACTTATCTG TATCAAAGCT
AAATCTGTTG TTTTAGCAAC GGGTGGCGCA GGTCGTGTTT ACCACTGTAA TACTAACGGC
GGTATCGTAA CTGGCGATGG TATGGCAATG GCGTATCGCC ATGGTATCCC TCTGCGTGAT
ATGGAATTCG TTCAATACCA CCCAACTGGC TTACCAGGTA CTGGTATCTT GATGACTGAA
GGTTGTCGTG GTGAAGGCGG TATCATGATC AATAAAAATG GTTACCGTTA CCTACAAGAT
TACGGTATGG GTCCAGAAAC ACCTATCGGT GAGCCAAAGA ACAAATACAT GGAACTGGGT
CCTCGTGACA AAGTTTCACA AGCATTTTGG CATGAACTTC AAAAAGGCAA CACTATTAAA
CACCCACTGG GTGATGTAGT GCATTTGGAT CTTCGTCACC TAGGTGAAGA ATACCTAAAT
GAGCGTCTTC CGTTTATCTG TGAGCTATCA AAAGCTTACG TTAACGTTGA TCCAGCTAAA
GAACCAATCC CAATTCGCCC TACTGTTCAC TACACCATGG GTGGTATTGA AACGGATAAG
AACAACGAAA CAAACATCAA AGGCCTATTC GCGGTTGGTG AATGTTCATC TGTTGGTCTT
CACGGTGCAA ACCGTTTAGG TTCAAACTCT CTAGCTGAGC TTGTTGTATT TGGTCGTCTT
GCTGGTGAAA AAGCCGCTGA ACGTGCCGCT GAATTCACAA CTTGGAACGA TGCTTCTATC
CAAACTCAAA TCGAAGCTGT TGAAGCTCGC ATTGATGTTT TACTAGCACA AGAAGGCGAT
GAAAACTGGG CTGATATCCG TACTGAAATG GGTCACTCAA TGGAAGCGGG CTGTGGTATC
TACCGTAAAG AGCACGAAAT GCAAGATACG GTTGATAAAC TGGCTGAGCT GAAAAAACGT
TACAAAAACA TCAGCATCAA AGACAAAGGA AAAGTATTCA ATACTGACCT TTTATACGCT
ATCGAAGTGG GTTACGGCCT TGAAGTTGCT GAAGCAATGG CTCACTCTGC CATTCAACGT
AAAGAGTCTC GTGGTGCACA CCAACGTTTA GATGAAGGTT GTACAGAACG TGATGATGTG
AATTACTTAA AACACTCATT AGCGTATTAC AACGAAGATG CAGCGCCAAC AATCAAGTAC
AGTGGCGTAA CCATCACAAA ATCTCAACCA AAAGCTCGCC TATATGGTGA AGCAGCAGAA
AAAGCAGCAG CAGAAGAAGC TGCCGCGGCG AAAAACGCAG AGGAGCAAGC ATAA
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| Protein sequence | MINLIFYLLS RRITVKTITT DIAVIGAGGA GLRTAIAAAE ANPELNIALI SKVYPMRSHT
VAAEGGSAAV TKEEDTLDNH FNDTVGGGDW LCEQDVVEYF VKNAYREMTQ LEQWGCPWSR
KENGEVNVRR FGGMKVERTW FAADKTGFHM LHTLFQTSMK YPQINRYDEY FVVDLLVEDG
QVQGLIAIHM AEGELICIKA KSVVLATGGA GRVYHCNTNG GIVTGDGMAM AYRHGIPLRD
MEFVQYHPTG LPGTGILMTE GCRGEGGIMI NKNGYRYLQD YGMGPETPIG EPKNKYMELG
PRDKVSQAFW HELQKGNTIK HPLGDVVHLD LRHLGEEYLN ERLPFICELS KAYVNVDPAK
EPIPIRPTVH YTMGGIETDK NNETNIKGLF AVGECSSVGL HGANRLGSNS LAELVVFGRL
AGEKAAERAA EFTTWNDASI QTQIEAVEAR IDVLLAQEGD ENWADIRTEM GHSMEAGCGI
YRKEHEMQDT VDKLAELKKR YKNISIKDKG KVFNTDLLYA IEVGYGLEVA EAMAHSAIQR
KESRGAHQRL DEGCTERDDV NYLKHSLAYY NEDAAPTIKY SGVTITKSQP KARLYGEAAE
KAAAEEAAAA KNAEEQA
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