| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2785 |
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| Symbol | psd |
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| ID | 6987916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 3017678 |
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| End bp | 3018541 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643381064 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_002264121 |
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| Protein GI | 209696191 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCAGATA ATTTAAAAAT CGGGTTACAA TATTTAACTC CAAAACATGC ACTTACTCGT
TTGGCTGGCA AATTAGCATC AGCAAAAATG GGCTGGTTAA CCACTGCGGT AATTAAGTGG
TTCATTAAAC AATACAACGT TGAAATGAGT GAAGCTAAAA ACCCGGATCC TGAAGCATAT
TCTACATTCA ATAACTTTTT TGTTCGTGAA TTAGAAGATG GCGCACGCCC AATTAATGAC
GATGAGAATG TTATCTCTCA CCCTGCAGAT GCTTGCGTAA GTCAATTTGG CCCAATTACC
GATGGTCAAT TAGTTCAAGC AAAAGGTCAC GTTTACTCAG CTCAAGAGTT ACTGGGTGGC
GACGCTGAAT TAGCGGAAGA ATTTATAGGT GGCGAATTCG CAACTCTGTA TTTATCTCCG
CGCGATTATC ATCGTGTTCA CATGCCATGC GATGCGACAT TACGCAAAAT GGTTTATGTT
CCTGGCGATT TATTCTCAGT GAATCCATTA ACAGCAGAAA ACGTTCCTAA TTTATTTGCT
CGTAATGAAC GTGTTGTCTG TATTTTTGAT ACTGAATTTG GTCCGATGGC GCAAGTCTTA
GTCGGTGCAA CTATCGTTGG TAGTATTGAA ACGACATGGG CAGATACGGT TACACCACCG
ACTGGCCCCG CAGTTAAAAC ATGGCACTAC CCACTTTCTG GCGATGATGT AATTTGCTTT
AAGAAAGGTG AGGAAATGGG TCGCTTTAAA TTAGGCTCTA CGGTTATTAA CTTATTTGCT
CCTAATTCAA TTACCTTTGA TGAATCAATG AAAAATGGCG TCCCAACTCG TTTAGGTACT
CCATTTGCTC ACATTGCAAA ATAA
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| Protein sequence | MSDNLKIGLQ YLTPKHALTR LAGKLASAKM GWLTTAVIKW FIKQYNVEMS EAKNPDPEAY
STFNNFFVRE LEDGARPIND DENVISHPAD ACVSQFGPIT DGQLVQAKGH VYSAQELLGG
DAELAEEFIG GEFATLYLSP RDYHRVHMPC DATLRKMVYV PGDLFSVNPL TAENVPNLFA
RNERVVCIFD TEFGPMAQVL VGATIVGSIE TTWADTVTPP TGPAVKTWHY PLSGDDVICF
KKGEEMGRFK LGSTVINLFA PNSITFDESM KNGVPTRLGT PFAHIAK
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