| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2783 |
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| Symbol | orn |
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| ID | 6988190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 3015920 |
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| End bp | 3016465 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643381062 |
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| Product | oligoribonuclease |
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| Protein accession | YP_002264119 |
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| Protein GI | 209696189 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAATTA ATGATCAAAA CCTGATTTGG GTAGATTTGG AGATGACAGG CTTAGATCCT
GAAACTCATA AAATCATCGA AATCGCATCC ATTGTAACTG ATGCTCAGCT AAATATTTTA
GCAGAAGGGC CTGTTATTGC TATTCATCAA TCAGAAGGTG AGTTGGCTAA GATGGATGAC
TGGTGTACCA ATACACATAC TAATAGTGGT TTGGTTGCTA GAGTAAATGC GAGCGAGCAT
ACGGAAGCGT CTGCTATTGA AGAGACAATT GCATTTCTTG AAAAGTGGGT ACCAAAAGGC
GTATCGCCAA TTTGTGGTAA CAGCATTGGC CAAGATCGTC GTTTTCTTTA TAAGCACATG
CCAAAATTGG AAGAATATTT CCATTATCGT TATGTTGATG TGAGCACAAT TAAAGAGCTT
ACTCGCCGTT GGAAACCTGA AGTACTTGAT GGCTTTGAAA AAACAGGGAC ACATTTAGCA
TTAGATGATA TCCGTGAATC TATCGCTGAA TTGAAGTATT ACCGTAAAAA TATCTTCACA
ATTTAA
|
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| Protein sequence | MAINDQNLIW VDLEMTGLDP ETHKIIEIAS IVTDAQLNIL AEGPVIAIHQ SEGELAKMDD
WCTNTHTNSG LVARVNASEH TEASAIEETI AFLEKWVPKG VSPICGNSIG QDRRFLYKHM
PKLEEYFHYR YVDVSTIKEL TRRWKPEVLD GFEKTGTHLA LDDIRESIAE LKYYRKNIFT
I
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